| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GACTTTATAA (2) TTATCATCTC TTGTCATCTC (2)
| 13.1 | 0.0131 |
| Cb medulloblastoma | TTCAACCAAA
| 2.3 | 0.0023 |
| P8 GC+1d culture | GACTTTATAA (2) TTATCATCTC TTGTCATCTC (2)
| 12.6 | 0.0126 |
| P8 GC+SHH+1d culture | CTGATAAAGC GACTTTATAA (2) TTATCATCTC TTCAACCAAA TTGTCATCTC (2)
| 16.5 | 0.0165 |
| P1 cortex | GACTTTATAA (2)
| 9.1 | 0.0091 |
| Hypothalamus | GACTTTATAA (2) TTCAACCAAA TTGTCATCTC (2)
| 9 | 0.009 |
| E12.5 retina | GACTTTATAA (2) TTGTCATCTC (2)
| 3.8 | 0.0038 |
| E14.5 retina | GACTTTATAA (2) TTCAACCAAA
| 14.5 | 0.0145 |
| E16.5 retina | CTGATAAAGC GACTTTATAA (2) TTGTCATCTC (2)
| 7.2 | 0.0072 |
| E18.5 retina | AAAACAGTTA (4) CTGATAAAGC GACTTTATAA (2) TTGTCATCTC (2)
| 9 | 0.009 |
| P0.5 retina | AAAACAGTTA (4) GACTTTATAA (2) TTATCATCTC TTGTCATCTC (2)
| 11.8 | 0.0118 |
| P2.5 retina | CTGATAAAGC GACTTTATAA (2) TTATCATCTC
| 5.4 | 0.0054 |
| P4.5 retina | CTGATAAAGC GACTTTATAA (2) TTATCATCTC TTCAACCAAA TTTTCATTTC (2)
| 17.9 | 0.0179 |
| P6.5 retina | CTGATAAAGC TTATCATCTC TTCAACCAAA TTGTCATCTC (2)
| 8.4 | 0.0084 |
| P10.5 crx- retina | TTATCATCTC
| 3.7 | 0.0037 |
| P10.5 crx+ retina | GACTTTATAA (2) TTATCATCTC TTGTCATCTC (2)
| 7.6 | 0.0076 |
| ONL | AAAACAGTTA (4) CTGATAAAGC
| 5.7 | 0.0057 |