Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29196	Cyc1	cytochrome c-1	15		66445
Gene Ontology	electron transport | electron transporter activity | heme binding | integral to membrane | mitochondrial electron transport chain | mitochondrion | mitochondrion | oxidative phosphorylation
Human Homolog	CYC1[cytochrome c-1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 126 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGATATGTGG (2) 32.6 0.0326 P8 Cb GC GCCTTCTCAG 13.1 0.0131 P8 Cb GC GCGGCGGCGG (24) 6.5 0.0065 P8 Cb GC CGGCCAGGGA (2) 1.6 0.0016 P8 Cb GC GCTCCTCCCA (7) 1.6 0.0016 Cb medulloblastoma GCCTTCTCAG 37 0.037 Cb medulloblastoma GCTCCTCCCA (7) 9.2 0.0092 Cb medulloblastoma GCATAGGTCA (2) 4.6 0.0046 Cb medulloblastoma GCGGCGGCGG (24) 4.6 0.0046 Cb medulloblastoma GCTCTCAAGG (3) 4.6 0.0046 Cb medulloblastoma GTGGTGAAGA (8) 4.6 0.0046 Cb medulloblastoma GGATATGTGG (2) 2.3 0.0023 P8 GC+1d culture GCCTTCTCAG 30.8 0.0308 P8 GC+1d culture GGATATGTGG (2) 6.8 0.0068 P8 GC+1d culture GCGGCGGCGG (24) 4.6 0.0046 P8 GC+1d culture GGAAAATCCC (9) 2.3 0.0023 P8 GC+1d culture CGGCCAGGGA (2) 1.1 0.0011 P8 GC+1d culture CTGTGGAAGG (3) 1.1 0.0011 P8 GC+1d culture GCTCCTCCCA (7) 1.1 0.0011 P8 GC+SHH+1d culture GCCTTCTCAG 21.1 0.0211 P8 GC+SHH+1d culture GCGGCGGCGG (24) 16.4 0.0164 P8 GC+SHH+1d culture CAGGCCACCA (4) 1.2 0.0012 P8 GC+SHH+1d culture GCCTTCCTCA (7) 1.2 0.0012 P8 GC+SHH+1d culture GGAAAATCCC (9) 1.2 0.0012 P8 GC+SHH+1d culture GGATATGTGG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGGTGAAGA (8) 1.2 0.0012 3T3 fibroblasts GGATATGTGG (2) 10.5 0.0105 3T3 fibroblasts GCCTTCTCAG 3.5 0.0035 3T3 fibroblasts GCGGCGGCGG (24) 3.5 0.0035 3T3 fibroblasts GCTTCCTTCC (4) 3.5 0.0035 3T3 fibroblasts GTGGTGAAGA (8) 3.5 0.0035 E15 cortex GCCTTCTCAG 19.8 0.0198 E15 cortex GCTCCTCCCA (7) 4.9 0.0049 E15 cortex GGAAAATCCC (9) 4.9 0.0049 P1 cortex GCCTTCTCAG 22.7 0.0227 P1 cortex GGAAAATCCC (9) 9.1 0.0091 Hypothalamus GCCTTCTCAG 16.3 0.0163 Hypothalamus GCGGCGGCGG (24) 7.2 0.0072 Hypothalamus GGATATGTGG (2) 3.6 0.0036 Hypothalamus GGGGGGGGGA (14) 3.6 0.0036 Hypothalamus AAGCGGCATA 1.8 0.0018 Hypothalamus CGGCCAGGGA (2) 1.8 0.0018 Hypothalamus GCCTTCCTCA (7) 1.8 0.0018 Hypothalamus GCTCCTCCCA (7) 1.8 0.0018 Hypothalamus GTGGTGAGGA (2) 1.8 0.0018 E12.5 retina GCGGCGGCGG (24) 15 0.015 E12.5 retina GCCTTCTCAG 9.4 0.0094 E12.5 retina GGGGGGGGGA (14) 3.8 0.0038 E12.5 retina CTGTGGAAGG (3) 1.9 0.0019 E12.5 retina GTAATGTGGA (4) 1.9 0.0019 E14.5 retina GCCTTCTCAG 12.8 0.0128 E14.5 retina GCGGCGGCGG (24) 5.5 0.0055 E14.5 retina GATATGTGGG 1.8 0.0018 E14.5 retina GCTCCTCCCA (7) 1.8 0.0018 E14.5 retina GCTTCCTTCC (4) 1.8 0.0018 E14.5 retina GTAATGTGGA (4) 1.8 0.0018 E14.5 retina GTGGTGAAGA (8) 1.8 0.0018 E16.5 retina GCCTTCTCAG 25.4 0.0254 E16.5 retina GCGGCGGCGG (24) 14.5 0.0145 E16.5 retina AAGCGGCATA 3.6 0.0036 E16.5 retina GCTCCTCCCA (7) 1.8 0.0018 E18.5 retina GCCTTCTCAG 25.5 0.0255 E18.5 retina GCGGCGGCGG (24) 9.1 0.0091 E18.5 retina GTAATGTGGA (4) 3.6 0.0036 E18.5 retina GTGGTGAAGA (8) 3.6 0.0036 E18.5 retina AAGCGGCATA 1.8 0.0018 E18.5 retina CAGGCCACCA (4) 1.8 0.0018 E18.5 retina GCCTTTTCAG (3) 1.8 0.0018 E18.5 retina GGGGGGGGGA (14) 1.8 0.0018 P0.5 retina GCCTTCTCAG 29.4 0.0294 P0.5 retina GCGGCGGCGG (24) 7.9 0.0079 P0.5 retina GGATATGTGG (2) 5.9 0.0059 P0.5 retina GCTCCTCCCA (7) 2 0.002 P0.5 retina GTGGTGAAGA (8) 2 0.002 P2.5 retina GCCTTCTCAG 26.4 0.0264 P2.5 retina GCGGCGGCGG (24) 7 0.007 P2.5 retina GCATAGGTCA (2) 1.8 0.0018 P2.5 retina GGAAAATCCC (9) 1.8 0.0018 P2.5 retina GGATATGTGG (2) 1.8 0.0018 P2.5 retina GTAATGTGGA (4) 1.8 0.0018 P2.5 retina GTGGTGAAGA (8) 1.8 0.0018 P4.5 retina GCCTTCTCAG 23.8 0.0238 P4.5 retina GCGGCGGCGG (24) 4 0.004 P4.5 retina GCATAGGTCA (2) 2 0.002 P4.5 retina GCCTTTTCAG (3) 2 0.002 P4.5 retina GCTCCTCCCA (7) 2 0.002 P4.5 retina GCTCTCAAGG (3) 2 0.002 P4.5 retina GGATATGTGG (2) 2 0.002 P4.5 retina GGGGGGGGGA (14) 2 0.002 P4.5 retina GTGGTGAAGA (8) 2 0.002 P6.5 retina GCCTTCTCAG 28.3 0.0283 P6.5 retina GGATATGTGG (2) 6.7 0.0067 P6.5 retina GCGGCGGCGG (24) 5 0.005 P6.5 retina GCCTTTTCAG (3) 3.3 0.0033 P6.5 retina GCTCCTCCCA (7) 1.7 0.0017 P6.5 retina GCTTCCTTCC (4) 1.7 0.0017 P6.5 retina GGAAAATCCC (9) 1.7 0.0017 P6.5 retina GTGGTGAAGA (8) 1.7 0.0017 P10.5 crx- retina GCCTTCTCAG 42.7 0.0427 P10.5 crx- retina GGATATGTGG (2) 3.7 0.0037 P10.5 crx- retina GCCTTCCTCA (7) 1.9 0.0019 P10.5 crx- retina GCCTTTTCAG (3) 1.9 0.0019 P10.5 crx- retina GCGGCGGCGG (24) 1.9 0.0019 P10.5 crx- retina GCTCCTCCCA (7) 1.9 0.0019 P10.5 crx- retina GGGGGGGGGA (14) 1.9 0.0019 P10.5 crx- retina GTGGTGAAGA (8) 1.9 0.0019 P10.5 crx+ retina GCCTTCTCAG 19.2 0.0192 P10.5 crx+ retina GCGGCGGCGG (24) 15.4 0.0154 P10.5 crx+ retina GGATATGTGG (2) 7.7 0.0077 P10.5 crx+ retina GTAATGTGGA (4) 5.8 0.0058 P10.5 crx+ retina GCCTTTTCAG (3) 3.8 0.0038 P10.5 crx+ retina GCTCCTCCCA (7) 3.8 0.0038 P10.5 crx+ retina GTGGTGAAGA (8) 1.9 0.0019 P10.5 crx+ retina GTGGTGAGGA (2) 1.9 0.0019 Adult retinal GCCTTCTCAG 25.9 0.0259 Adult retinal GCGGCGGCGG (24) 16.7 0.0167 Adult retinal CTGTGGAAGG (3) 1.9 0.0019 Adult retinal GGAAAATCCC (9) 1.9 0.0019 Adult retinal GTAATGTGGA (4) 1.9 0.0019 ONL GCCTTCTCAG 15.3 0.0153 ONL GCGGCGGCGG (24) 9.6 0.0096 ONL GTAATGTGGA (4) 9.6 0.0096 ONL GATATGTGGG 3.8 0.0038 ONL CAGGCCACCA (4) 1.9 0.0019 ONL GGATATGTGG (2) 1.9 0.0019 ONL GTGGTGAAGA (8) 1.9 0.0019