Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.292027	Rps25	ribosomal protein S25	9		75617
Gene Ontology	biological_process unknown | cellular_component unknown | structural constituent of ribosome
Human Homolog	RPS25[ribosomal protein S25]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 201 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACAGGTTCA (3) 179.4 0.1794 P8 Cb GC GCGAAGCTCA 107.7 0.1077 P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CATCTCCGCC (5) 6.5 0.0065 P8 Cb GC AAATCAGATG (3) 4.9 0.0049 P8 Cb GC AATAGGTCCA 4.9 0.0049 P8 Cb GC AACAGGTTTA 3.3 0.0033 P8 Cb GC AACTGGTTCA (3) 3.3 0.0033 P8 Cb GC GCCAACAAAC (3) 3.3 0.0033 P8 Cb GC TGGAAAAATA (5) 3.3 0.0033 P8 Cb GC AACAGGTGGG (2) 1.6 0.0016 P8 Cb GC ATGCCTCCCA (3) 1.6 0.0016 P8 Cb GC GACAGGTTCA (4) 1.6 0.0016 Cb medulloblastoma AACAGGTTCA (3) 101.7 0.1017 Cb medulloblastoma GCGAAGCTCA 62.4 0.0624 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 Cb medulloblastoma AATAGGTCCA 2.3 0.0023 Cb medulloblastoma CATCTTCGCC 2.3 0.0023 Cb medulloblastoma CCTCCCAAAG (3) 2.3 0.0023 Cb medulloblastoma GCCAACAAAC (3) 2.3 0.0023 Cb medulloblastoma TGGAAAAATA (5) 2.3 0.0023 P8 GC+1d culture AACAGGTTCA (3) 143.8 0.1438 P8 GC+1d culture GCGAAGCTCA 59.4 0.0594 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CATCTTCGCC 3.4 0.0034 P8 GC+1d culture AAATCAGATG (3) 2.3 0.0023 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture AACAGGTGGG (2) 1.1 0.0011 P8 GC+1d culture AATAGGTCCA 1.1 0.0011 P8 GC+1d culture CATCTCCGCC (5) 1.1 0.0011 P8 GC+1d culture CCTCCCAAAG (3) 1.1 0.0011 P8 GC+1d culture GACAGGTTCA (4) 1.1 0.0011 P8 GC+SHH+1d culture AACAGGTTCA (3) 159.2 0.1592 P8 GC+SHH+1d culture GCGAAGCTCA 87.8 0.0878 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture CATCTTCGCC 4.7 0.0047 P8 GC+SHH+1d culture AACAGGTGGG (2) 2.3 0.0023 P8 GC+SHH+1d culture AATAGGTCCA 2.3 0.0023 P8 GC+SHH+1d culture CATCTCCGCC (5) 2.3 0.0023 P8 GC+SHH+1d culture GACAGGTTCA (4) 2.3 0.0023 P8 GC+SHH+1d culture GCCAACAAAC (3) 2.3 0.0023 P8 GC+SHH+1d culture AAATCAGATG (3) 1.2 0.0012 P8 GC+SHH+1d culture AACTGGTTCA (3) 1.2 0.0012 P8 GC+SHH+1d culture AAGTCAGATG (9) 1.2 0.0012 P8 GC+SHH+1d culture TGGAAAAATA (5) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts GCGAAGCTCA 56.1 0.0561 3T3 fibroblasts AACAGGTTCA (3) 42.1 0.0421 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts CATCTTCGCC 7 0.007 3T3 fibroblasts CATCTCCGCC (5) 3.5 0.0035 3T3 fibroblasts CCTCCCAAAG (3) 3.5 0.0035 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex AACAGGTTCA (3) 29.7 0.0297 E15 cortex GCGAAGCTCA 29.7 0.0297 E15 cortex CCTCCCAAAG (3) 9.9 0.0099 E15 cortex AACAGGGTTC 4.9 0.0049 E15 cortex AACGGGTTCA 4.9 0.0049 E15 cortex CATCTCCGCC (5) 4.9 0.0049 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex GCGAAGCTCA 109.1 0.1091 P1 cortex AACAGGTTCA (3) 22.7 0.0227 P1 cortex CATCTTCGCC 18.2 0.0182 Hypothalamus AACAGGTTCA (3) 103.2 0.1032 Hypothalamus GCGAAGCTCA 27.2 0.0272 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus CATCTTCGCC 16.3 0.0163 Hypothalamus AAGTCAGATG (9) 1.8 0.0018 Hypothalamus CCTCCCAAAG (3) 1.8 0.0018 Hypothalamus GACAGGTTCA (4) 1.8 0.0018 Hypothalamus GCCAACAAAC (3) 1.8 0.0018 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 E12.5 retina GCGAAGCTCA 313.5 0.3135 E12.5 retina AACAGGTTCA (3) 257.2 0.2572 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CATCTTCGCC 5.6 0.0056 E12.5 retina AACAGGGTCA 3.8 0.0038 E12.5 retina AAATCAGATG (3) 1.9 0.0019 E12.5 retina AACAGGTGGG (2) 1.9 0.0019 E12.5 retina AACGGGTTCA 1.9 0.0019 E12.5 retina CATCTCCGCC (5) 1.9 0.0019 E12.5 retina CCTCCCAAAG (3) 1.9 0.0019 E14.5 retina AACAGGTTCA (3) 317 0.317 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina GCGAAGCTCA 27.3 0.0273 E14.5 retina CATCTTCGCC 20 0.02 E14.5 retina AACAGGGTTC 3.6 0.0036 E14.5 retina GCCAACAAAC (3) 3.6 0.0036 E14.5 retina GGATCACACA (3) 3.6 0.0036 E14.5 retina AACAGGGTCA 1.8 0.0018 E14.5 retina AACAGTTCAA (3) 1.8 0.0018 E14.5 retina ATGCCTCCCA (3) 1.8 0.0018 E14.5 retina CCTCCCAAAG (3) 1.8 0.0018 E14.5 retina GACAGGTTCA (4) 1.8 0.0018 E16.5 retina AACAGGTTCA (3) 278.9 0.2789 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GCGAAGCTCA 29 0.029 E16.5 retina CATCTTCGCC 9.1 0.0091 E16.5 retina CCTCCCAAAG (3) 9.1 0.0091 E16.5 retina GCCAACAAAC (3) 9.1 0.0091 E16.5 retina CATCTCCGCC (5) 5.4 0.0054 E16.5 retina AACAGGTGGG (2) 1.8 0.0018 E16.5 retina AACAGTTCAA (3) 1.8 0.0018 E16.5 retina AACGGGTTCA 1.8 0.0018 E16.5 retina ATGCCTCCCA (3) 1.8 0.0018 E16.5 retina GGATCACACA (3) 1.8 0.0018 E18.5 retina AACAGGTTCA (3) 203.7 0.2037 E18.5 retina GCGAAGCTCA 111 0.111 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CATCTTCGCC 10.9 0.0109 E18.5 retina AACAGGTTTA 1.8 0.0018 E18.5 retina AACAGTTCAA (3) 1.8 0.0018 E18.5 retina GACAGGTTCA (4) 1.8 0.0018 E18.5 retina GCCAACAAAC (3) 1.8 0.0018 E18.5 retina GGATCACACA (3) 1.8 0.0018 P0.5 retina AACAGGTTCA (3) 149.2 0.1492 P0.5 retina GCGAAGCTCA 121.7 0.1217 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina CATCTTCGCC 5.9 0.0059 P0.5 retina CATCTCCGCC (5) 3.9 0.0039 P0.5 retina CCTCCCAAAG (3) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AACAGGTGGG (2) 2 0.002 P0.5 retina AAGTCAGATG (9) 2 0.002 P0.5 retina GACAGGTTCA (4) 2 0.002 P0.5 retina GCCAACAAAC (3) 2 0.002 P0.5 retina GGATCACACA (3) 2 0.002 P2.5 retina AACAGGTTCA (3) 107.3 0.1073 P2.5 retina GCGAAGCTCA 105.6 0.1056 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina CATCTTCGCC 10.6 0.0106 P2.5 retina GCCAACAAAC (3) 8.8 0.0088 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina AACAGGGTTC 1.8 0.0018 P2.5 retina AACTGGTTCA (3) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina AACAGGTTCA (3) 101.1 0.1011 P4.5 retina GCGAAGCTCA 57.5 0.0575 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CATCTTCGCC 11.9 0.0119 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina GCCAACAAAC (3) 5.9 0.0059 P4.5 retina AACAGGGTCA 2 0.002 P4.5 retina AACAGGTTTA 2 0.002 P4.5 retina AACAGTTCAA (3) 2 0.002 P4.5 retina AAGTCAGATG (9) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina GCGAAGCTCA 125.1 0.1251 P6.5 retina AACAGGTTCA (3) 85 0.085 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina CATCTTCGCC 1.7 0.0017 P10.5 crx- retina AACAGGTTCA (3) 172.8 0.1728 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina GCGAAGCTCA 37.2 0.0372 P10.5 crx- retina CATCTTCGCC 5.6 0.0056 P10.5 crx- retina AACAGGTGGG (2) 1.9 0.0019 P10.5 crx- retina AACAGTTCAA (3) 1.9 0.0019 P10.5 crx- retina AACGGGTTCA 1.9 0.0019 P10.5 crx- retina AACTGGTTCA (3) 1.9 0.0019 P10.5 crx- retina ATGCCTCCCA (3) 1.9 0.0019 P10.5 crx- retina CCTCCCAAAG (3) 1.9 0.0019 P10.5 crx- retina GACAGGTTCA (4) 1.9 0.0019 P10.5 crx+ retina GCGAAGCTCA 128.8 0.1288 P10.5 crx+ retina AACAGGTTCA (3) 80.7 0.0807 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 P10.5 crx+ retina GCCAACAAAC (3) 5.8 0.0058 P10.5 crx+ retina CATCTTCGCC 3.8 0.0038 P10.5 crx+ retina AAATCAGATG (3) 1.9 0.0019 P10.5 crx+ retina AACAGGTGGG (2) 1.9 0.0019 P10.5 crx+ retina AAGTCAGATG (9) 1.9 0.0019 P10.5 crx+ retina CCTCCCAAAG (3) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal AACAGGTTCA (3) 57.4 0.0574 Adult retinal GCGAAGCTCA 33.3 0.0333 Adult retinal ATGAACACTG (30) 11.1 0.0111 Adult retinal GCCAACAAAC (3) 7.4 0.0074 Adult retinal AACAGGTGGG (2) 3.7 0.0037 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal AAATCAGATG (3) 1.9 0.0019 Adult retinal AACAGTTCAA (3) 1.9 0.0019 Adult retinal CATCTCCGCC (5) 1.9 0.0019 Adult retinal CCTCCCAAAG (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL AACAGGTTCA (3) 97.7 0.0977 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GCGAAGCTCA 23 0.023 ONL ATGAACACTG (30) 13.4 0.0134 ONL GCCAACAAAC (3) 5.7 0.0057 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AACAGGTTTA 1.9 0.0019 ONL AATAGGTCCA 1.9 0.0019 ONL CATCTTCGCC 1.9 0.0019 ONL GGGGGGGGGG (112) 1.9 0.0019