Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.292075	Spg7	spastic paraplegia 7 homolog (human)	8	8 E1	234847
Gene Ontology	ATP binding
Human Homolog	SPG7[spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive)] | SPG7[spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 100 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC TGGGTGCTGG (64) 8.2 0.0082 P8 Cb GC TGAGGAGGAG (5) 3.3 0.0033 P8 Cb GC GGCCAAAGAA (6) 1.6 0.0016 P8 Cb GC TGGCTGCTGG (16) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma TGGGTGCTGG (64) 9.2 0.0092 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 Cb medulloblastoma GGCCAAAGAA (6) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TGGGTGCTGG (64) 5.7 0.0057 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture TGAGGAGGAG (5) 1.1 0.0011 P8 GC+1d culture TGGCTGCTGG (16) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture TGGGTGCTGG (64) 3.5 0.0035 P8 GC+SHH+1d culture TGAGGAGGAG (5) 2.3 0.0023 P8 GC+SHH+1d culture GGCCAAAGAA (6) 1.2 0.0012 P8 GC+SHH+1d culture GGGGGGGGGC (15) 1.2 0.0012 P8 GC+SHH+1d culture TGGCTGCTGG (16) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts TGGGTGCTGG (64) 17.5 0.0175 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 3T3 fibroblasts TGGCTGCTGG (16) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex TGGGTGCTGG (64) 14.8 0.0148 E15 cortex GGCCAAAGAA (6) 4.9 0.0049 E15 cortex GGGCGGGGGG (11) 4.9 0.0049 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 E15 cortex TGGCTGCTGG (16) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex TGGGTGCTGG (64) 13.6 0.0136 P1 cortex GGCCAAAGAA (6) 4.5 0.0045 P1 cortex TGAGGAGGAG (5) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus TGGGTGCTGG (64) 9.1 0.0091 Hypothalamus TGGCTGCTGG (16) 3.6 0.0036 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina TGGGTGCTGG (64) 9.4 0.0094 E12.5 retina GGCCAAAGAA (6) 3.8 0.0038 E12.5 retina GGGCGGGGGG (11) 1.9 0.0019 E12.5 retina GGGGGGGGGC (15) 1.9 0.0019 E12.5 retina TGAGGAGGAG (5) 1.9 0.0019 E12.5 retina TGGCTGCTGG (16) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina TGGGTGCTGG (64) 54.7 0.0547 E14.5 retina TGGCTGCTGG (16) 23.7 0.0237 E14.5 retina TGTTTTGCAA (3) 3.6 0.0036 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina TGGGTGCTGG (64) 41.7 0.0417 E16.5 retina TGGCTGCTGG (16) 7.2 0.0072 E16.5 retina TGAGGAGGAG (5) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina TGGGTGCTGG (64) 20 0.02 E18.5 retina GGGGGGGGGC (15) 1.8 0.0018 E18.5 retina TGGCTGCTGG (16) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TGGGTGCTGG (64) 11.8 0.0118 P0.5 retina GGCCAAAGAA (6) 2 0.002 P0.5 retina TGAGGAGGAG (5) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina TGGGTGCTGG (64) 17.6 0.0176 P2.5 retina TGGCTGCTGG (16) 8.8 0.0088 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina GGGCGGGGGG (11) 3.5 0.0035 P2.5 retina GGCCAAAGAA (6) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina TGGGTGCTGG (64) 9.9 0.0099 P4.5 retina TGAGGAGGAG (5) 4 0.004 P4.5 retina GGCCAAAGAA (6) 2 0.002 P4.5 retina TGGCTGCTGG (16) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina TGGGTGCTGG (64) 13.3 0.0133 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina TGAGGAGGAG (5) 3.3 0.0033 P6.5 retina TGGCTGCTGG (16) 3.3 0.0033 P6.5 retina GGCCAAAGAA (6) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina TGGGTGCTGG (64) 20.4 0.0204 P10.5 crx- retina TGAGGAGGAG (5) 1.9 0.0019 P10.5 crx- retina TGGCTGCTGG (16) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina TGGGTGCTGG (64) 15.4 0.0154 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal TGGGTGCTGG (64) 13 0.013 Adult retinal GGCCAAAGAA (6) 7.4 0.0074 Adult retinal TGGCTGCTGG (16) 5.6 0.0056 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal TGAGGAGGAG (5) 1.9 0.0019 Adult retinal TGTTTTGCAA (3) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL TGGGTGCTGG (64) 40.2 0.0402 ONL TGGCTGCTGG (16) 5.7 0.0057 ONL GGCCAAAGAA (6) 1.9 0.0019 ONL GGGGGGGGGC (15) 1.9 0.0019 ONL GGGGGGGGGG (112) 1.9 0.0019