Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29247
2310009N05Rik
RIKEN cDNA 2310009N05 gene
18
66943
Human Homolog
PQLC1[PQ loop repeat containing 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 64 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
CTAAAAAAAA (
20
)
11.4
0.0114
P8 Cb GC
GTGGCTCGCC
(
2
)
3.3
0.0033
P8 Cb GC
GGCACAGAGG (
3
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
CTAAAAAAAA (
20
)
39.3
0.0393
Cb medulloblastoma
GTGGCTCGCC
(
2
)
4.6
0.0046
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
CTAAAAAAAA (
20
)
19.4
0.0194
P8 GC+1d culture
GTGGCTCGCC
(
2
)
3.4
0.0034
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
CTAAAAAAAA (
20
)
41
0.041
P8 GC+SHH+1d culture
GGCACAGAGG (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGGCTCGCC
(
2
)
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
CTAAAAAAAA (
20
)
14.8
0.0148
E15 cortex
GTGGCTCGCC
(
2
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
CTAAAAAAAA (
20
)
4.5
0.0045
P1 cortex
GTGGCTCCCC
(
3
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
CTAAAAAAAA (
20
)
16.3
0.0163
Hypothalamus
GTGGCTCCCC
(
3
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
CTAAAAAAAA (
20
)
11.3
0.0113
E12.5 retina
GTGGCTCCCC
(
3
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
CTAAAAAAAA (
20
)
12.8
0.0128
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
CTAAAAAAAA (
20
)
5.4
0.0054
E16.5 retina
GTGGCTCCCC
(
3
)
1.8
0.0018
E16.5 retina
GTGGCTCGCC
(
2
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
CTAAAAAAAA (
20
)
20
0.02
E18.5 retina
GTGGCTCCCC
(
3
)
5.5
0.0055
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
CTAAAAAAAA (
20
)
5.9
0.0059
P0.5 retina
GTGGCTCGCC
(
2
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
CTAAAAAAAA (
20
)
15.8
0.0158
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
CTAAAAAAAA (
20
)
29.7
0.0297
P4.5 retina
GTGGCTCCCC
(
3
)
4
0.004
P4.5 retina
GTGGCTCGCC
(
2
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
CTAAAAAAAA (
20
)
13.3
0.0133
P6.5 retina
GTGGCTCGCC
(
2
)
3.3
0.0033
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
CTAAAAAAAA (
20
)
5.6
0.0056
P10.5 crx- retina
GTGGCTCGCC
(
2
)
3.7
0.0037
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
CTAAAAAAAA (
20
)
7.7
0.0077
P10.5 crx+ retina
GTGGCTCGCC
(
2
)
3.8
0.0038
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
CTAAAAAAAA (
20
)
5.6
0.0056
Adult retinal
GTCTTCGGAG
(
2
)
3.7
0.0037
Adult retinal
GGCACAGAGG (
3
)
1.9
0.0019
Adult retinal
GTGGCTCCCC
(
3
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
GTGGCTCGCC
(
2
)
3.8
0.0038
ONL
CTAAAAAAAA (
20
)
1.9
0.0019
ONL
GTCTTCGGAG
(
2
)
1.9
0.0019
ONL
GTGGCTCCCC
(
3
)
1.9
0.0019
