Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.292492	Polr2c	polymerase (RNA) II (DNA directed) polypeptide C	8		20021
Gene Ontology	DNA binding | DNA-directed RNA polymerase activity | DNA-directed RNA polymerase II, core complex | nucleus | transcription | transferase activity
Human Homolog	POLR2C[polymerase (RNA) II (DNA directed) polypeptide C, 33kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGGGAAACA (12) 19.6 0.0196 P8 Cb GC GCCTCCCCTT (4) 6.5 0.0065 P8 Cb GC AAGGAGATTA (2) 3.3 0.0033 P8 Cb GC TAAAAATTCC (2) 1.6 0.0016 Cb medulloblastoma GGGGGAAACA (12) 16.2 0.0162 Cb medulloblastoma TGAGCGTGTG (5) 4.6 0.0046 Cb medulloblastoma AAGGAGATTA (2) 2.3 0.0023 P8 GC+1d culture GCCTCCCCTT (4) 20.5 0.0205 P8 GC+1d culture GGGGGAAACA (12) 8 0.008 P8 GC+1d culture AAGGAGATTA (2) 2.3 0.0023 P8 GC+1d culture AGATCCAGAA (3) 1.1 0.0011 P8 GC+SHH+1d culture GCCTCCCCTT (4) 24.6 0.0246 P8 GC+SHH+1d culture GGGGGAAACA (12) 8.2 0.0082 P8 GC+SHH+1d culture AAGGAGATTA (2) 2.3 0.0023 P8 GC+SHH+1d culture TAAAAATTCC (2) 1.2 0.0012 P8 GC+SHH+1d culture TGAACAGTGG (3) 1.2 0.0012 3T3 fibroblasts GCCTCCCCTT (4) 7 0.007 E15 cortex GCCTCCCCTT (4) 14.8 0.0148 E15 cortex GGGGGAAACA (12) 9.9 0.0099 E15 cortex AAGGAGATTA (2) 4.9 0.0049 P1 cortex AAGGAGATTA (2) 9.1 0.0091 P1 cortex GCCTCCCCTT (4) 4.5 0.0045 P1 cortex GGGGGAAACA (12) 4.5 0.0045 P1 cortex TAAAAATTCC (2) 4.5 0.0045 Hypothalamus GGGGGAAACA (12) 5.4 0.0054 Hypothalamus TAAAAATTCC (2) 1.8 0.0018 E12.5 retina GGGGGAAACA (12) 9.4 0.0094 E12.5 retina GCCTCCCCTT (4) 3.8 0.0038 E12.5 retina TGAACAGTGG (3) 3.8 0.0038 E14.5 retina GGGGGAAACA (12) 9.1 0.0091 E14.5 retina AAGGAGATTA (2) 5.5 0.0055 E16.5 retina GGGGGAAACA (12) 16.3 0.0163 E16.5 retina GCCTCCCCTT (4) 7.2 0.0072 E16.5 retina CGTCATCGTG (2) 1.8 0.0018 E16.5 retina TAAAAATTCC (2) 1.8 0.0018 E18.5 retina GGGGGAAACA (12) 21.8 0.0218 E18.5 retina TAAAAATTCC (2) 1.8 0.0018 P0.5 retina GGGGGAAACA (12) 11.8 0.0118 P0.5 retina GCCTCCCCTT (4) 9.8 0.0098 P2.5 retina GGGGGAAACA (12) 10.6 0.0106 P2.5 retina AAGGAGATTA (2) 3.5 0.0035 P2.5 retina TAAAAATTCC (2) 1.8 0.0018 P4.5 retina GGGGGAAACA (12) 17.8 0.0178 P4.5 retina GCCTCCCCTT (4) 4 0.004 P4.5 retina AAGGAGATTA (2) 2 0.002 P4.5 retina CGTCATCGTG (2) 2 0.002 P6.5 retina GGGGGAAACA (12) 8.3 0.0083 P6.5 retina GCCTCCCCTT (4) 5 0.005 P6.5 retina AGATCCAGAA (3) 1.7 0.0017 P10.5 crx- retina GGGGGAAACA (12) 14.9 0.0149 P10.5 crx- retina AAGGAGATTA (2) 5.6 0.0056 P10.5 crx- retina GCCTCCCCTT (4) 1.9 0.0019 P10.5 crx+ retina GGGGGAAACA (12) 23.1 0.0231 P10.5 crx+ retina AAGGAGATTA (2) 5.8 0.0058 P10.5 crx+ retina TAAAAATTCC (2) 3.8 0.0038 P10.5 crx+ retina GCCTCCCCTT (4) 1.9 0.0019 Adult retinal GGGGGAAACA (12) 9.3 0.0093 Adult retinal TGAACAGTGG (3) 1.9 0.0019 Adult retinal TGAGCGTGTG (5) 1.9 0.0019 ONL GGGGGAAACA (12) 7.7 0.0077 ONL AGATCCAGAA (3) 1.9 0.0019