Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.292510	AL023026	expressed sequence AL023026	5		100781
Mm.292510	Rac1	RAS-related C3 botulinum substrate 1	5	5 82.0 cM	19353
Gene Ontology	cell adhesion | cell adhesion | cell motility | cytoplasm | cytoplasmic vesicle | cytoskeleton organization and biogenesis | dendrite morphogenesis | endocytosis | extrinsic to plasma membrane | extrinsic to plasma membrane | GTP binding | GTP binding | GTPase activity | GTPase activity | hyperosmotic response | inflammatory response | intracellular signaling cascade | lamellipodium | lamellipodium biogenesis | membrane fraction | positive regulation of actin filament polymerization | protein binding | response to wounding | small GTPase mediated signal transduction | small GTPase mediated signal transduction
Human Homolog	RAC1[ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 168 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) ATTTGCACAC (2) CAAAACATAC (2) CCCCACACAC (2) GAGTAATTCA (2) GCGAAAGAGA (3) GGCCAAAGAA GTGGGTCACA (7) TATGAATTAA (2) TGCACAGAGT TGGGGCACAG (5) 259.3 0.2593 Cb medulloblastoma AAAAAAAAAA (2) ATTTGCACAC (2) GAGTAATACA GAGTAATTCA (2) GCGAAAGAGA (3) GGCCAAAGAA GGTGGTGGCT GTGGGTCACA (7) TATGAATTAA (2) TGCACAGAGT 867 0.867 P8 GC+1d culture AAAAAAAAAA (2) ATTTGCACAC (2) CCCCACACAC (2) GAGTAATACA GAGTAATTCA (2) GCGAAAGAGA (3) GTGGGTCACA (7) TATGAATTAA (2) TGAGTGCTGC TGCACAGAGT TGGGGCACAG (5) 271.7 0.2717 P8 GC+SHH+1d culture AAAAAAAAAA (2) ATTTGCACAC (2) CAAAACATAC (2) CCCCACACAC (2) GAGTAATACA GAGTAATTCA (2) GCGAAAGAGA (3) GCTCTGCCTA (2) GGCCAAAGAA GTGGGTCACA (7) TATGAATTAA (2) TGGGGCACAG (5) 337.2 0.3372 3T3 fibroblasts AAAAAAAAAA (2) ATTTGCACAC (2) GCGAAAGAGA (3) 35 0.035 E15 cortex AAAAAAAAAA (2) CCCCACACAC (2) GCGAAAGAGA (3) GGCCAAAGAA GTGGGTCACA (7) TATGAATTAA (2) 262.1 0.2621 P1 cortex AAAAAAAAAA (2) CAAAACATAC (2) CCCCACACAC (2) GGCCAAAGAA TATGAATTAA (2) 281.7 0.2817 Hypothalamus AAAAAAAAAA (2) ACAGTGTTGG (3) ATTTGCACAC (2) CAAAACATAC (2) CCCCACACAC (2) GAGTAATACA GAGTAATTCA (2) GTGGGTCACA (7) TATGAATTAA (2) TGCACAGAGT TGGGGCACAG (5) 213.6 0.2136 E12.5 retina AAAAAAAAAA (2) GAGTAATACA GCGAAAGAGA (3) GGCCAAAGAA GTGGGTCACA (7) TATGAATTAA (2) TGCACAGAGT 169.1 0.1691 E14.5 retina AAAAAAAAAA (2) ATTTGCACAC (2) GCGAAAGAGA (3) GTGGGTCACA (7) TATGAATTAA (2) TGCACAGAGT 134.7 0.1347 E16.5 retina AAAAAAAAAA (2) ACAGTGTTGG (3) ATTTGCACAC (2) CAAAACATAC (2) CCCCACACAC (2) GAGTAATACA GAGTAATTCA (2) GCCAGCCCCT (2) GCTCTGCCTA (2) GTGGGTCACA (7) TATGAATTAA (2) TGAGTGCTGC TGCACAGAGT TGGGGCACAG (5) 108.5 0.1085 E18.5 retina AAAAAAAAAA (2) ACAGTGTTGG (3) ATTTGCACAC (2) GAGTAATACA GTGGGTCACA (7) TATGAATTAA (2) TGCACAGAGT TGGGGCACAG (5) 429.2 0.4292 P0.5 retina AAAAAAAAAA (2) ATTTGCACAC (2) CCCCACACAC (2) GCCAGCCCCT (2) GCGAAAGAGA (3) GCTCTGCCTA (2) GGCCAAAGAA GTGGGTCACA (7) TATGAATTAA (2) TGCACAGAGT 151.4 0.1514 P2.5 retina AAAAAAAAAA (2) ATTTGCACAC (2) GAGTAATACA GAGTAATTCA (2) GGCCAAAGAA GTGGGTCACA (7) TATGAATTAA (2) TGCACAGAGT 366.2 0.3662 P4.5 retina AAAAAAAAAA (2) AACCAGTCAA GAGTAATACA GAGTAATTCA (2) GCGAAAGAGA (3) GGCCAAAGAA TATGAATTAA (2) TGCACAGAGT TGGGGCACAG (5) 333 0.333 P6.5 retina AAAAAAAAAA (2) AACCAGTCAA ATTTGCACAC (2) CCCCACACAC (2) GAGTAATTCA (2) GGCCAAAGAA TATGAATTAA (2) TGCACAGAGT 296.9 0.2969 P10.5 crx- retina AAAAAAAAAA (2) ATTTGCACAC (2) CCCCACACAC (2) GAGTAATACA GAGTAATTCA (2) TATGAATTAA (2) TGAGTGCTGC TGCACAGAGT 65.3 0.0653 P10.5 crx+ retina AAAAAAAAAA (2) ATTTGCACAC (2) GAGTAATACA TATGAATTAA (2) TGAGTGCTGC 111.4 0.1114 Adult retinal AAAAAAAAAA (2) AACCAGTCAA ATTTGCACAC (2) CCCCACACAC (2) GAGTAATTCA (2) GCCAGCCCCT (2) GCGAAAGAGA (3) GGCCAAAGAA GTGGGTCACA (7) TGCACAGAGT 85.5 0.0855 ONL AAAAAAAAAA (2) ATTTGCACAC (2) GAGTAATACA GGCCAAAGAA GTGGGTCACA (7) TATGAATTAA (2) 128.3 0.1283