Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.292742	AU023006	expressed sequence AU023006	9		102683
Mm.292742	2610101N10Rik	RIKEN cDNA 2610101N10 gene	9		67958
Human Homolog	SR140[U2-associated SR140 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTCTTTA (9) 3.3 0.0033 P8 Cb GC AATAAACTGC (3) 1.6 0.0016 P8 Cb GC AGTAACTGCA (3) 1.6 0.0016 P8 Cb GC TCTACAAATC (2) 1.6 0.0016 Cb medulloblastoma AATAAACTGC (3) 50.9 0.0509 Cb medulloblastoma AGTAACTGCA (3) 4.6 0.0046 Cb medulloblastoma CTACTTTGTT (4) 4.6 0.0046 Cb medulloblastoma ATATTTGTAC (3) 2.3 0.0023 P8 GC+1d culture TTTCTTTTGT (5) 2.3 0.0023 P8 GC+1d culture AGTAACTGCA (3) 1.1 0.0011 P8 GC+1d culture ATCAAATGTA (4) 1.1 0.0011 P8 GC+1d culture TTTTTCTTTA (9) 1.1 0.0011 P8 GC+SHH+1d culture AATAAACTGC (3) 2.3 0.0023 P8 GC+SHH+1d culture ATATTTGTAC (3) 1.2 0.0012 P8 GC+SHH+1d culture ATCAAATGTA (4) 1.2 0.0012 P8 GC+SHH+1d culture CTACTTTGTT (4) 1.2 0.0012 3T3 fibroblasts AGTAACTGCA (3) 3.5 0.0035 E15 cortex AATAAACTGC (3) 4.9 0.0049 E15 cortex TGGAACCTCA (3) 4.9 0.0049 E15 cortex TTTCTTTTGT (5) 4.9 0.0049 P1 cortex AATAAACTGC (3) 13.6 0.0136 P1 cortex AGTAACTGCA (3) 4.5 0.0045 Hypothalamus AATAAACTGC (3) 12.7 0.0127 Hypothalamus TTTTTCTTTA (9) 3.6 0.0036 Hypothalamus TGGAACCTCA (3) 1.8 0.0018 E12.5 retina AATAAACTGC (3) 3.8 0.0038 E12.5 retina AGTAACTGCA (3) 3.8 0.0038 E12.5 retina CTACTTTGTT (4) 1.9 0.0019 E14.5 retina AATAAACTGC (3) 5.5 0.0055 E16.5 retina AATAAACTGC (3) 9.1 0.0091 E16.5 retina AGTAACTGCA (3) 3.6 0.0036 E16.5 retina ATATTTGTAC (3) 1.8 0.0018 E16.5 retina TTTTTCTTTA (9) 1.8 0.0018 E18.5 retina AATAAACTGC (3) 16.4 0.0164 E18.5 retina ATCAAATGTA (4) 1.8 0.0018 E18.5 retina TTTCTTTTGT (5) 1.8 0.0018 P0.5 retina AATAAACTGC (3) 7.9 0.0079 P0.5 retina CTACTTTGTT (4) 3.9 0.0039 P0.5 retina AGTAACTGCA (3) 2 0.002 P0.5 retina ATATTTGTAC (3) 2 0.002 P0.5 retina TGGAACCTCA (3) 2 0.002 P2.5 retina AATAAACTGC (3) 5.3 0.0053 P2.5 retina ATCAAATGTA (4) 5.3 0.0053 P4.5 retina AATAAACTGC (3) 4 0.004 P4.5 retina ATATTTGTAC (3) 2 0.002 P4.5 retina TTTTTCTTTA (9) 2 0.002 P6.5 retina CTACTTTGTT (4) 11.7 0.0117 P6.5 retina AATAAACTGC (3) 5 0.005 P6.5 retina TCTACAAATC (2) 1.7 0.0017 P10.5 crx- retina AGTAACTGCA (3) 5.6 0.0056 P10.5 crx- retina AATAAACTGC (3) 3.7 0.0037 P10.5 crx- retina TCTACAAATC (2) 1.9 0.0019 P10.5 crx- retina TTTCTTTTGT (5) 1.9 0.0019 P10.5 crx- retina TTTTTCTTTA (9) 1.9 0.0019 P10.5 crx+ retina AATAAACTGC (3) 9.6 0.0096 P10.5 crx+ retina AGTAACTGCA (3) 5.8 0.0058 P10.5 crx+ retina CTACTTTGTT (4) 3.8 0.0038 Adult retinal CTACTTTGTT (4) 5.6 0.0056 Adult retinal AGTAACTGCA (3) 1.9 0.0019 Adult retinal TCTACAAATC (2) 1.9 0.0019 Adult retinal TGGAACCTCA (3) 1.9 0.0019 ONL CTACTTTGTT (4) 3.8 0.0038 ONL AATAAACTGC (3) 1.9 0.0019 ONL AGTAACTGCA (3) 1.9 0.0019 ONL TGGAACCTCA (3) 1.9 0.0019 ONL TTTCTTTTGT (5) 1.9 0.0019