Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29296	Sec13l1	SEC13-like 1 (S. cerevisiae)	6	6 52.5 cM	110379
Gene Ontology	intracellular protein transport | protein transport | protein transporter activity | transport
Human Homolog	SEC13L1[SEC13-like 1 (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAAAAAAAA (28) 55.5 0.0555 P8 Cb GC TAAGGAACAA 8.2 0.0082 P8 Cb GC ATGCACAGAT (5) 1.6 0.0016 Cb medulloblastoma GTAAAAAAAA (28) 129.5 0.1295 Cb medulloblastoma TAAGGAACAA 6.9 0.0069 Cb medulloblastoma ATGCACAGAT (5) 2.3 0.0023 P8 GC+1d culture GTAAAAAAAA (28) 74.2 0.0742 P8 GC+1d culture TAAGGAACAA 18.3 0.0183 P8 GC+1d culture ATGCACAGAT (5) 4.6 0.0046 P8 GC+1d culture TGTGGGCACT 1.1 0.0011 P8 GC+SHH+1d culture GTAAAAAAAA (28) 132.3 0.1323 P8 GC+SHH+1d culture TAAGGAACAA 15.2 0.0152 P8 GC+SHH+1d culture ATGCACAGAT (5) 2.3 0.0023 P8 GC+SHH+1d culture AGCACCTCGG (4) 1.2 0.0012 3T3 fibroblasts GTAAAAAAAA (28) 7 0.007 3T3 fibroblasts TAAGGAACAA 3.5 0.0035 E15 cortex GTAAAAAAAA (28) 34.6 0.0346 P1 cortex GTAAAAAAAA (28) 36.4 0.0364 P1 cortex ATGCACAGAT (5) 4.5 0.0045 P1 cortex TAAGGAACAA 4.5 0.0045 Hypothalamus GTAAAAAAAA (28) 99.6 0.0996 Hypothalamus TAAGGAACAA 5.4 0.0054 E12.5 retina GTAAAAAAAA (28) 41.3 0.0413 E12.5 retina TAAGGAACAA 9.4 0.0094 E14.5 retina GTAAAAAAAA (28) 82 0.082 E14.5 retina TAAGGAACAA 10.9 0.0109 E14.5 retina ATGCACAGAT (5) 1.8 0.0018 E14.5 retina TGTGGGCACT 1.8 0.0018 E16.5 retina GTAAAAAAAA (28) 68.8 0.0688 E16.5 retina TAAGGAACAA 21.7 0.0217 E16.5 retina AGCACCTCGG (4) 1.8 0.0018 E16.5 retina TGTGGGCACT 1.8 0.0018 E18.5 retina GTAAAAAAAA (28) 189.2 0.1892 E18.5 retina TAAGGAACAA 9.1 0.0091 E18.5 retina ATGCACAGAT (5) 3.6 0.0036 P0.5 retina GTAAAAAAAA (28) 51 0.051 P0.5 retina TAAGGAACAA 17.7 0.0177 P0.5 retina ATGCACAGAT (5) 2 0.002 P2.5 retina GTAAAAAAAA (28) 103.8 0.1038 P2.5 retina TAAGGAACAA 19.4 0.0194 P2.5 retina ATGCACAGAT (5) 5.3 0.0053 P4.5 retina GTAAAAAAAA (28) 142.7 0.1427 P4.5 retina TAAGGAACAA 15.9 0.0159 P4.5 retina ATGCACAGAT (5) 4 0.004 P6.5 retina GTAAAAAAAA (28) 66.7 0.0667 P6.5 retina TAAGGAACAA 10 0.01 P6.5 retina ATGCACAGAT (5) 5 0.005 P10.5 crx- retina GTAAAAAAAA (28) 26 0.026 P10.5 crx- retina TAAGGAACAA 18.6 0.0186 P10.5 crx- retina ATGCACAGAT (5) 5.6 0.0056 P10.5 crx- retina AGCACCTCGG (4) 1.9 0.0019 P10.5 crx+ retina GTAAAAAAAA (28) 55.8 0.0558 P10.5 crx+ retina ATGCACAGAT (5) 9.6 0.0096 P10.5 crx+ retina TAAGGAACAA 7.7 0.0077 Adult retinal GTAAAAAAAA (28) 22.2 0.0222 Adult retinal ATGCACAGAT (5) 11.1 0.0111 Adult retinal TAAGGAACAA 5.6 0.0056 ONL GTAAAAAAAA (28) 24.9 0.0249 ONL TAAGGAACAA 5.7 0.0057 ONL ATGCACAGAT (5) 1.9 0.0019