Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.293096	2510006D16Rik	RIKEN cDNA 2510006D16 gene	4		76799
Human Homolog	RP4-622L5[hypothetical protein RP4-622L5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC TCTATCTCAG (2) 6.5 0.0065 P8 Cb GC GAAAGGGCTG (4) 3.3 0.0033 P8 Cb GC GTGGTATACT (3) 3.3 0.0033 P8 Cb GC TTCGGGAGAT (3) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GAAAGGGCTG (4) 2.3 0.0023 Cb medulloblastoma GCTTCTCCAG (4) 2.3 0.0023 Cb medulloblastoma TCTATCTCAG (2) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture GAAAGGGCTG (4) 6.8 0.0068 P8 GC+1d culture GTGGTATACT (3) 3.4 0.0034 P8 GC+1d culture AACCCAAGAG (3) 1.1 0.0011 P8 GC+1d culture GCTGGATGTG (5) 1.1 0.0011 P8 GC+1d culture GCTTCTCCAG (4) 1.1 0.0011 P8 GC+1d culture TTCGGGAGAT (3) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture GAAAGGGCTG (4) 7 0.007 P8 GC+SHH+1d culture GCTTCTCCAG (4) 2.3 0.0023 P8 GC+SHH+1d culture TCTATCTCAG (2) 2.3 0.0023 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GAAAGGGCTG (4) 10.5 0.0105 3T3 fibroblasts TCTATCTCAG (2) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex GAAAGGGCTG (4) 18.2 0.0182 P1 cortex TCTATCTCAG (2) 13.6 0.0136 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GAAAGGGCTG (4) 3.6 0.0036 Hypothalamus GTGGTATACT (3) 1.8 0.0018 Hypothalamus TCTATCTCAG (2) 1.8 0.0018 Hypothalamus TTCGGGAGAT (3) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GAAAGGGCTG (4) 9.4 0.0094 E12.5 retina TCTATCTCAG (2) 3.8 0.0038 E12.5 retina GCTGGATGTG (5) 1.9 0.0019 E12.5 retina GTGGTATACT (3) 1.9 0.0019 E12.5 retina TGATCCTGCC (3) 1.9 0.0019 E12.5 retina TGTACATAAG 1.9 0.0019 E12.5 retina TTCGGGAGAT (3) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GAAAGGGCTG (4) 7.3 0.0073 E14.5 retina GTGGTATACT (3) 7.3 0.0073 E14.5 retina TCTATCTCAG (2) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina TCTATCTCAG (2) 7.2 0.0072 E16.5 retina GAAAGGGCTG (4) 3.6 0.0036 E16.5 retina AACCCAAGAG (3) 1.8 0.0018 E16.5 retina GTGGTATACT (3) 1.8 0.0018 E16.5 retina TGATCCTGCC (3) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GTGGTATACT (3) 1.8 0.0018 E18.5 retina TCTATCTCAG (2) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GAAAGGGCTG (4) 11.8 0.0118 P0.5 retina GCTTCTCCAG (4) 2 0.002 P0.5 retina TCTATCTCAG (2) 2 0.002 P0.5 retina TTCGGGAGAT (3) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GAAAGGGCTG (4) 8.8 0.0088 P2.5 retina TGATCCTGCC (3) 7 0.007 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GAAAGGGCTG (4) 4 0.004 P4.5 retina TGATCCTGCC (3) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GAAAGGGCTG (4) 6.7 0.0067 P6.5 retina TGATCCTGCC (3) 5 0.005 P6.5 retina TTCGGGAGAT (3) 5 0.005 P6.5 retina AACCCAAGAG (3) 1.7 0.0017 P6.5 retina TGTACATAAG 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GAAAGGGCTG (4) 11.1 0.0111 P10.5 crx- retina TTCGGGAGAT (3) 9.3 0.0093 P10.5 crx- retina TCTATCTCAG (2) 7.4 0.0074 P10.5 crx- retina GTGGTATACT (3) 3.7 0.0037 P10.5 crx- retina GCTGGATGTG (5) 1.9 0.0019 P10.5 crx- retina TGTACATAAG 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GAAAGGGCTG (4) 5.8 0.0058 P10.5 crx+ retina GTGGTATACT (3) 1.9 0.0019 P10.5 crx+ retina TCTATCTCAG (2) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GAAAGGGCTG (4) 14.8 0.0148 Adult retinal TCTATCTCAG (2) 3.7 0.0037 Adult retinal TGATCCTGCC (3) 3.7 0.0037 Adult retinal TTCGGGAGAT (3) 3.7 0.0037 Adult retinal GTGGTATACT (3) 1.9 0.0019 Adult retinal TGTACATAAG 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GAAAGGGCTG (4) 11.5 0.0115 ONL TTCGGGAGAT (3) 5.7 0.0057 ONL AACCCAAGAG (3) 1.9 0.0019 ONL TCTATCTCAG (2) 1.9 0.0019 ONL TGTACATAAG 1.9 0.0019