Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29389	Tenc1	tensin like C1 domain-containing phosphatase	15		209039
Gene Ontology	biological_process unknown | cellular_component unknown | protein kinase binding | receptor binding
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 266 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCAGGAGA (2) AATTTCAAAA AGTTCTTCCA (2) CCTCCCTTTT GACACCCAGG GACTGTGTCG GCCAAGGCAG GCTGCTTCTC (2) GCTTGACATA GTGGAGACCA GTGGTGCACG TGCTTCAATT (3) 133.7 0.1337 Cb medulloblastoma AAAAAGGAAA AAGAGGAGAA (2) AAGCAGGAGA (2) AATTTCAAAA CCCCCCCCCC (3) CCTCCCTTTT GACTGTGTCC GAGAGACCCT (3) GCTTGACATA GTGGTGCACG TGAGTGTGTG (2) TGCTTCAATT (3) 129.3 0.1293 P8 GC+1d culture AAGCAGGAGA (2) AATTTCAAAA AGCATTCACA (3) AGCCACGGGG (3) AGTTCTTCCA (2) CCCCCCCCCC (3) CCTCCCTTTT GACACCCAGG GACTGTGTCG GCTCTGTTTG (2) GCTTGACATA GTGGTGCACG TACCACCATA TGCTTCAATT (3) 138.1 0.1381 P8 GC+SHH+1d culture AAGAGGAGAA (2) AAGCAGGAGA (2) AATTTCAAAA AGCATTCACA (3) AGCCACGGGG (3) CCCCCCCCCC (3) CCTCCCTTTT GAGGAGGGGG (3) GCCAAGGCAG GCTTGACATA GTGGAGACCA GTGGTGCACG TGCTTCAATT (3) TTTGAGAGCT 166.3 0.1663 3T3 fibroblasts AATTTCAAAA AGCCACGGGG (3) CCTCCCTTTT CTGCTAATGC GAGGGATGGG (2) GCTCTGTTTG (2) GTGGTGCACG 98 0.098 E15 cortex AAGCAGGAGA (2) AATTTCAAAA AGCCACGGGG (3) CAGGGCCTGG (2) CCCCCCCCCC (3) CCTCCCTTTT GACACCCAGG GACTGTGTCC GCCAAGGCAG GCCTGCCTGC (2) GTGGTGCACG TGCTTCAATT (3) 123.2 0.1232 P1 cortex AAGCAGGAGA (2) AATTTCAAAA AGTTCTTCCA (2) CAGGGCCTGG (2) CCTCCCTTTT GCCTGCCTGC (2) GCTTGACATA GTGGAGACCA GTGGTGCACG TGCTTCAATT (3) TGTGTGTAGA 113.3 0.1133 Hypothalamus AAGCAGGAGA (2) AATTTCAAAA CAGGGCCCTG CCTCCCTTTT GACACCCAGG GACTGTGTCC GACTGTGTCG GAGGAGGGGG (3) GCTCTGTTTG (2) GTGGAGACCA GTGGTGCACG TGCTTCAATT (3) 79.5 0.0795 E12.5 retina AAAAAGGAAA AAGCAGGAGA (2) AATTTCAAAA AGCCACGGGG (3) AGTTCTTCCA (2) CCTCCCTTTT GACACCCAGG GACTGTGTCC GACTGTGTCG GAGAGACCCT (3) GCTTGACATA GCTTTTAATA (3) GTGGTGCACG TGAGTGTGTG (2) TGCTTCAATT (3) 330.6 0.3306 E14.5 retina AAGCAGGAGA (2) AATTTCAAAA AGCCACGGGG (3) CCAGCAGCTG CCTCCCTTTT GAAAAGGAGA GACTGTGTCC GAGAGACCCT (3) GAGGAGGGGG (3) GAGGGATGGG (2) GCTGCTTCTC (2) GGAATGGGAA GTGGTGCACG TGAGTGTGTG (2) TGCTTCAATT (3) 245.8 0.2458 E16.5 retina AATTTCAAAA AGCCACGGGG (3) CCAGCAGCTG CCAGGCAGGG CCTCCCTTTT GACTGTGTCC GAGGGATGGG (2) GCCTGCCTGC (2) GCTCTGTTTG (2) GTGGTGCACG TGCTTCAATT (3) 219.1 0.2191 E18.5 retina AAGCAGGAGA (2) AATTTCAAAA AGCCACGGGG (3) CAGGGCCTGG (2) CCTCCCTTTT GACACCCAGG GACTGTGTCC GAGGGATGGG (2) GCCAAGGCAG GCTTGACATA GCTTTTAATA (3) GGAATGGGAA GTGGTGCACG TACCACCATA TGCTTCAATT (3) TGTGTGTAGA TTTGAGAGCT 199.9 0.1999 P0.5 retina AAGCAGGAGA (2) AATTTCAAAA AGCCACGGGG (3) AGTTCTTCCA (2) CCTCCCTTTT GACACCCAGG GACTGTGTCC GAGGGATGGG (2) GCTTGACATA GTGGTGCACG TACCACCATA TGCTTCAATT (3) 112 0.112 P2.5 retina AAGCAGGAGA (2) AATTTCAAAA AGCCACGGGG (3) CCCCCCCCCC (3) CCTCCCTTTT GACACCCAGG GACTGTGTCC GACTGTGTCG GCCAAGGCAG GCCTGCCTGC (2) GCTCTGTTTG (2) GCTGCTTCTC (2) GCTTGACATA GTGGAGACCA GTGGTGCACG TGCTTCAATT (3) TGTGTGTAGA 188.7 0.1887 P4.5 retina AAGCAGGAGA (2) AATTTCAAAA AGCATTCACA (3) AGCCACGGGG (3) AGTTCTTCCA (2) CAGGCTGGTG CCTCCCTTTT GACTGTGTCC GAGAGACCCT (3) GCTTGACATA GTGGAGACCA GTGGTGCACG TGCTTCAATT (3) TGTGTGTAGA TTTGAGAGCT 140.8 0.1408 P6.5 retina AAAAAGGAAA AAGCAGGAGA (2) AATTTCAAAA AGCATTCACA (3) AGCCACGGGG (3) CCTCCCTTTT GACACCCAGG GACTGTGTCC GCCAAGGCAG GCTGCTTCTC (2) GCTTGACATA GTGGTGCACG TACCACCATA TGCTTCAATT (3) 140.2 0.1402 P10.5 crx- retina AAGCAGGAGA (2) AATTTCAAAA AGCATTCACA (3) CAGGCTGGTG CCAGGCAGGG CCTCCCTTTT GCCAAGGCAG GCTCTGTTTG (2) GCTTGACATA GTGGTGCACG TGAGTGTGTG (2) TTTGAGAGCT 243.6 0.2436 P10.5 crx+ retina AAGCAGGAGA (2) AATTTCAAAA AGCATTCACA (3) AGCCACGGGG (3) CAGGCTGGTG CAGGGCCCTG CCCCCCCCCC (3) CCTCCCTTTT GCCAAGGCAG GCTCTGTTTG (2) GCTGCTTCTC (2) GCTTGACATA GGCCAGGGCA (2) GTGGAGACCA GTGGTGCACG TGAGTGTGTG (2) TGCTTCAATT (3) 134.3 0.1343 Adult retinal AAGCAGGAGA (2) AATTTCAAAA AGCCACGGGG (3) AGTTCTTCCA (2) CCTCCCTTTT GACACCCAGG GCCAAGGCAG GCCTGCCTGC (2) GCTTGACATA GGAATGGGAA GGCCAGGGCA (2) GTGGTGCACG TGCTTCAATT (3) 63.2 0.0632 ONL AAAAAGGAAA AAGCAGGAGA (2) AATTTCAAAA CAGGGCCCTG CCAGGCAGGG CCTCCCTTTT GACACCCAGG GAGAGACCCT (3) GAGGAGGGGG (3) GCCAAGGCAG GCTTGACATA GGCCAGGGCA (2) GTGGTGCACG TGCTTCAATT (3) 126.4 0.1264