Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.294020	Aspscr1	alveolar soft part sarcoma chromosome region, candidate 1 (human)	11		68938
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	ASPSCR1[alveolar soft part sarcoma chromosome region, candidate 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTATAAGTT (2) 6.5 0.0065 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC CAGCACCATT (3) 1.6 0.0016 P8 Cb GC CCCCACACAC (5) 1.6 0.0016 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture CCCCACACAC (5) 10.3 0.0103 P8 GC+1d culture AGGGTGATGC (4) 2.3 0.0023 P8 GC+1d culture TTTATAAGTT (2) 1.1 0.0011 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CCCCACACAC (5) 3.5 0.0035 P8 GC+SHH+1d culture TTTATAAGTT (2) 3.5 0.0035 3T3 fibroblasts AGGGGTTGGG 3.5 0.0035 E15 cortex CCCCACACAC (5) 24.7 0.0247 E15 cortex AGGGGTTGGG 4.9 0.0049 E15 cortex TTTATAAGTT (2) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex CCCCACACAC (5) 18.2 0.0182 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus AGGGGTTGGG 7.2 0.0072 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus TTTATAAGTT (2) 3.6 0.0036 Hypothalamus AGGGTGATGC (4) 1.8 0.0018 Hypothalamus CCCCACACAC (5) 1.8 0.0018 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina AGGGGTTGGG 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina TTTATAAGTT (2) 10.9 0.0109 E14.5 retina GACTAGCTGG 1.8 0.0018 E16.5 retina CCCCACACAC (5) 9.1 0.0091 E16.5 retina TTTATAAGTT (2) 5.4 0.0054 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina GACTAGCTGG 1.8 0.0018 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina TTTATAAGTT (2) 7.3 0.0073 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina CCCCACACAC (5) 5.9 0.0059 P0.5 retina TTTATAAGTT (2) 3.9 0.0039 P0.5 retina CAGCACCATT (3) 2 0.002 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina TTTATAAGTT (2) 3.5 0.0035 P2.5 retina AGGGGTTGGG 1.8 0.0018 P2.5 retina AGGGTGATGC (4) 1.8 0.0018 P2.5 retina CAGCACCATT (3) 1.8 0.0018 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina AGGGTGATGC (4) 2 0.002 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina AGGGGTTGGG 3.3 0.0033 P6.5 retina TTTATAAGTT (2) 3.3 0.0033 P6.5 retina CCCCACACAC (5) 1.7 0.0017 P10.5 crx- retina CCCCACACAC (5) 5.6 0.0056 P10.5 crx- retina AGGGGTTGGG 3.7 0.0037 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina AGGGTGATGC (4) 1.9 0.0019 P10.5 crx+ retina CAGCACCATT (3) 1.9 0.0019 P10.5 crx+ retina GACTAGCTGG 1.9 0.0019 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal CCCCACACAC (5) 1.9 0.0019 Adult retinal TTTATAAGTT (2) 1.9 0.0019 ONL AGGGGTTGGG 13.4 0.0134 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL TTTATAAGTT (2) 1.9 0.0019