Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29405	Rbx1	ring-box 1	15		56438
Gene Ontology	nucleus | protein binding | protein ubiquitination | SCF ubiquitin ligase complex | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	RBX1[ring-box 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTCCTTTTTC 8.2 0.0082 P8 Cb GC CAGCAATCTC 4.9 0.0049 P8 Cb GC CAGGCAAAAT (2) 4.9 0.0049 P8 Cb GC TAGTTAACAG 1.6 0.0016 Cb medulloblastoma GTCCTTTTTC 11.6 0.0116 Cb medulloblastoma TAGTTAACAG 6.9 0.0069 Cb medulloblastoma CAACCGTACA 2.3 0.0023 Cb medulloblastoma CAGCAATCTC 2.3 0.0023 P8 GC+1d culture GTCCTTTTTC 29.7 0.0297 P8 GC+1d culture TAGTTAACAG 10.3 0.0103 P8 GC+1d culture CAGCAATCTC 4.6 0.0046 P8 GC+1d culture AGCTAAAATT (2) 2.3 0.0023 P8 GC+1d culture CAACCGTACA 2.3 0.0023 P8 GC+SHH+1d culture GTCCTTTTTC 11.7 0.0117 P8 GC+SHH+1d culture TAGTTAACAG 5.9 0.0059 P8 GC+SHH+1d culture CAACCGTACA 3.5 0.0035 P8 GC+SHH+1d culture CAGGCAAAAT (2) 2.3 0.0023 P8 GC+SHH+1d culture AGCTAAAATT (2) 1.2 0.0012 P8 GC+SHH+1d culture CAGCAATCTC 1.2 0.0012 3T3 fibroblasts CAGCAATCTC 3.5 0.0035 E15 cortex CAGCAATCTC 9.9 0.0099 E15 cortex GTCCTTTTTC 9.9 0.0099 P1 cortex AGCTAAAATT (2) 4.5 0.0045 P1 cortex GTCCTTTTTC 4.5 0.0045 Hypothalamus GTCCTTTTTC 9.1 0.0091 Hypothalamus TAGTTAACAG 3.6 0.0036 Hypothalamus CAACCGTACA 1.8 0.0018 Hypothalamus CAGCAATCTC 1.8 0.0018 E12.5 retina GTCCTTTTTC 20.7 0.0207 E12.5 retina TAGTTAACAG 3.8 0.0038 E12.5 retina CAACCGTACA 1.9 0.0019 E12.5 retina CAGCAATCTC 1.9 0.0019 E12.5 retina CAGGCAAAAT (2) 1.9 0.0019 E14.5 retina CAGGCAAAAT (2) 5.5 0.0055 E14.5 retina GTCCTTTTTC 5.5 0.0055 E14.5 retina CAACCGTACA 3.6 0.0036 E14.5 retina TAGTTAACAG 3.6 0.0036 E14.5 retina AGCTAAAATT (2) 1.8 0.0018 E14.5 retina CAGCAATCTC 1.8 0.0018 E16.5 retina GTCCTTTTTC 9.1 0.0091 E16.5 retina CAACCGTACA 1.8 0.0018 E16.5 retina CAGCAATCTC 1.8 0.0018 E16.5 retina CAGGCAAAAT (2) 1.8 0.0018 E16.5 retina CTTTTCATTT (2) 1.8 0.0018 E16.5 retina TAGTTAACAG 1.8 0.0018 E18.5 retina GTCCTTTTTC 27.3 0.0273 E18.5 retina CAGGCAAAAT (2) 5.5 0.0055 P0.5 retina GTCCTTTTTC 11.8 0.0118 P0.5 retina CAGGCAAAAT (2) 2 0.002 P0.5 retina TAGTTAACAG 2 0.002 P2.5 retina GTCCTTTTTC 19.4 0.0194 P2.5 retina TAGTTAACAG 5.3 0.0053 P2.5 retina CAGGCAAAAT (2) 3.5 0.0035 P2.5 retina CAGCAATCTC 1.8 0.0018 P4.5 retina GTCCTTTTTC 13.9 0.0139 P4.5 retina CAGGCAAAAT (2) 4 0.004 P4.5 retina CAGCAATCTC 2 0.002 P4.5 retina TAGTTAACAG 2 0.002 P6.5 retina GTCCTTTTTC 16.7 0.0167 P6.5 retina TAGTTAACAG 3.3 0.0033 P6.5 retina CAGGCAAAAT (2) 1.7 0.0017 P6.5 retina CTTTTCATTT (2) 1.7 0.0017 P6.5 retina TTTTTGTTTT (4) 1.7 0.0017 P10.5 crx- retina GTCCTTTTTC 9.3 0.0093 P10.5 crx- retina TAGTTAACAG 3.7 0.0037 P10.5 crx- retina CTTTTCATTT (2) 1.9 0.0019 P10.5 crx- retina TATGTGGAGA 1.9 0.0019 P10.5 crx+ retina GTCCTTTTTC 11.5 0.0115 P10.5 crx+ retina CAACCGTACA 1.9 0.0019 P10.5 crx+ retina CAGCAATCTC 1.9 0.0019 P10.5 crx+ retina CAGGCAAAAT (2) 1.9 0.0019 P10.5 crx+ retina CTTTTCATTT (2) 1.9 0.0019 P10.5 crx+ retina TATGTGGAGA 1.9 0.0019 Adult retinal GTCCTTTTTC 3.7 0.0037 Adult retinal CAACCGTACA 1.9 0.0019 Adult retinal CAGCAATCTC 1.9 0.0019 Adult retinal CAGGCAAAAT (2) 1.9 0.0019 ONL CAGGCAAAAT (2) 9.6 0.0096 ONL TTTTTGTTTT (4) 7.7 0.0077 ONL GTCCTTTTTC 3.8 0.0038