Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29407	Vhlh	von Hippel-Lindau syndrome homolog	6	6 49.45 cM	22346
Gene Ontology	negative regulation of cell cycle | nucleus | protein ubiquitination
Human Homolog	VHL[von Hippel-Lindau tumor suppressor] | VHL[von Hippel-Lindau tumor suppressor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAGTGCACT (4) 3.3 0.0033 P8 Cb GC ATTCCGAATT (107) 1.6 0.0016 Cb medulloblastoma TGTGCACACA (12) 2.3 0.0023 P8 GC+1d culture CAAGTGCACT (4) 11.4 0.0114 P8 GC+1d culture TTACTACACA 2.3 0.0023 P8 GC+1d culture TGTGCACACG (2) 1.1 0.0011 P8 GC+SHH+1d culture CAAGTGCACT (4) 10.5 0.0105 P8 GC+SHH+1d culture TTACTACACA 3.5 0.0035 P8 GC+SHH+1d culture GAAAAGACAA (5) 2.3 0.0023 P8 GC+SHH+1d culture TGTGCACACA (12) 1.2 0.0012 3T3 fibroblasts CAAGTGCACT (4) 7 0.007 3T3 fibroblasts GAAAAGACAA (5) 3.5 0.0035 3T3 fibroblasts TGTGCACACA (12) 3.5 0.0035 E15 cortex CAAGTGCACT (4) 4.9 0.0049 Hypothalamus CAAGTGCACT (4) 1.8 0.0018 Hypothalamus TTACTACACA 1.8 0.0018 E12.5 retina CAAGTGCACT (4) 5.6 0.0056 E12.5 retina GAAAAGACAA (5) 1.9 0.0019 E12.5 retina TAAGGAACAG (2) 1.9 0.0019 E14.5 retina CAAGTGCACT (4) 10.9 0.0109 E14.5 retina TGTGCACACA (12) 3.6 0.0036 E16.5 retina CAAGTGCACT (4) 9.1 0.0091 E16.5 retina TGTGCACACA (12) 1.8 0.0018 E16.5 retina TTACTACACA 1.8 0.0018 E18.5 retina CAAGTGCACT (4) 7.3 0.0073 E18.5 retina TGTGCACACA (12) 1.8 0.0018 P0.5 retina CAAGTGCACT (4) 3.9 0.0039 P0.5 retina GAAAAGACAA (5) 3.9 0.0039 P0.5 retina TGTGCACACA (12) 2 0.002 P2.5 retina CAAGTGCACT (4) 12.3 0.0123 P2.5 retina GAAAAGACAA (5) 1.8 0.0018 P2.5 retina TAAGGAACAG (2) 1.8 0.0018 P4.5 retina CAAGTGCACT (4) 13.9 0.0139 P4.5 retina GAAAAGACAA (5) 5.9 0.0059 P4.5 retina ATTCCGAATT (107) 2 0.002 P4.5 retina TAAGGAACAG (2) 2 0.002 P4.5 retina TGTGCACACA (12) 2 0.002 P6.5 retina CAAGTGCACT (4) 6.7 0.0067 P6.5 retina ATTCCGAATT (107) 3.3 0.0033 P6.5 retina TGTGCACACG (2) 1.7 0.0017 P10.5 crx- retina CAAGTGCACT (4) 13 0.013 P10.5 crx- retina TGTGCACACA (12) 3.7 0.0037 P10.5 crx- retina TGTGCACACG (2) 1.9 0.0019 P10.5 crx+ retina CAAGTGCACT (4) 9.6 0.0096 P10.5 crx+ retina TTACTACACA 3.8 0.0038 Adult retinal TGTGCACACA (12) 3.7 0.0037 Adult retinal CAAGTGCACT (4) 1.9 0.0019 ONL ATTCCGAATT (107) 3.8 0.0038 ONL CAAGTGCACT (4) 3.8 0.0038 ONL TGTGCACACA (12) 1.9 0.0019