Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.294159	0610011D08Rik	RIKEN cDNA 0610011D08 gene	4		66588
Gene Ontology	ATP binding | cytidylate kinase activity | cytoplasm | extracellular space | kinase activity | nucleus | phosphotransferase activity, phosphate group as acceptor | pyrimidine nucleotide biosynthesis | pyrimidine ribonucleotide biosynthesis | transferase activity | uridine kinase activity
Human Homolog	UMP-CMPK[UMP-CMP kinase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTACTTGTT 9.8 0.0098 P8 Cb GC AAAAACATAT 3.3 0.0033 P8 Cb GC TTACTTGTTT (3) 1.6 0.0016 Cb medulloblastoma GTTACTTGTT 4.6 0.0046 Cb medulloblastoma AAAAACATAT 2.3 0.0023 Cb medulloblastoma CATACTAAAA (2) 2.3 0.0023 Cb medulloblastoma CATTCACTAG 2.3 0.0023 P8 GC+1d culture GTTACTTGTT 9.1 0.0091 P8 GC+1d culture GCATTGCAAA (2) 6.8 0.0068 P8 GC+1d culture TTACTTGTTT (3) 4.6 0.0046 P8 GC+1d culture CATACTAAAA (2) 1.1 0.0011 P8 GC+1d culture CATTCACTAG 1.1 0.0011 P8 GC+1d culture CTTGAATATT 1.1 0.0011 P8 GC+SHH+1d culture GTTACTTGTT 8.2 0.0082 P8 GC+SHH+1d culture CTTGAATATT 2.3 0.0023 P8 GC+SHH+1d culture TTACTTGTTT (3) 2.3 0.0023 P8 GC+SHH+1d culture CATACTAAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture CATTCACTAG 1.2 0.0012 P8 GC+SHH+1d culture GGTTACTTGT (2) 1.2 0.0012 E15 cortex GCATTGCAAA (2) 4.9 0.0049 P1 cortex TGGTTTGCTG (5) 4.5 0.0045 P1 cortex TTACTTGTTT (3) 4.5 0.0045 Hypothalamus GTTACTTGTT 3.6 0.0036 Hypothalamus TTACTTGTTT (3) 3.6 0.0036 Hypothalamus CATACTAAAA (2) 1.8 0.0018 Hypothalamus CATTCACTAG 1.8 0.0018 Hypothalamus GCATTGCAAA (2) 1.8 0.0018 E12.5 retina GCATTGCAAA (2) 9.4 0.0094 E12.5 retina GTTACTTGTT 3.8 0.0038 E12.5 retina TTACTTGTTT (3) 1.9 0.0019 E14.5 retina GTTACTTGTT 12.8 0.0128 E14.5 retina TTACTTGTTT (3) 5.5 0.0055 E14.5 retina GCATTGCAAA (2) 3.6 0.0036 E14.5 retina CATACTAAAA (2) 1.8 0.0018 E14.5 retina CTTGAATATT 1.8 0.0018 E14.5 retina GGTTACTTGT (2) 1.8 0.0018 E16.5 retina TTACTTGTTT (3) 5.4 0.0054 E16.5 retina TGGTTTGCTG (5) 3.6 0.0036 E16.5 retina AAAAACATAT 1.8 0.0018 E16.5 retina CATACTAAAA (2) 1.8 0.0018 E16.5 retina CTTGAATATT 1.8 0.0018 E16.5 retina GCATTGCAAA (2) 1.8 0.0018 E16.5 retina GGTTACTTGT (2) 1.8 0.0018 E16.5 retina GTTACTTGTT 1.8 0.0018 E18.5 retina GCATTGCAAA (2) 9.1 0.0091 E18.5 retina GTTACTTGTT 7.3 0.0073 E18.5 retina AAAAACATAT 1.8 0.0018 E18.5 retina CATTCACTAG 1.8 0.0018 E18.5 retina GGTTACTTGT (2) 1.8 0.0018 E18.5 retina TTACTTGTTT (3) 1.8 0.0018 P0.5 retina GTTACTTGTT 9.8 0.0098 P0.5 retina GCATTGCAAA (2) 3.9 0.0039 P0.5 retina TTACTTGTTT (3) 2 0.002 P2.5 retina GCATTGCAAA (2) 12.3 0.0123 P2.5 retina GTTACTTGTT 5.3 0.0053 P2.5 retina CATTCACTAG 1.8 0.0018 P4.5 retina GCATTGCAAA (2) 5.9 0.0059 P4.5 retina GTTACTTGTT 4 0.004 P4.5 retina CTTGAATATT 2 0.002 P4.5 retina TGGTTTGCTG (5) 2 0.002 P4.5 retina TTACTTGTTT (3) 2 0.002 P6.5 retina GTTACTTGTT 10 0.01 P6.5 retina GCATTGCAAA (2) 5 0.005 P6.5 retina TTACTTGTTT (3) 5 0.005 P10.5 crx- retina GTTACTTGTT 5.6 0.0056 P10.5 crx- retina TTACTTGTTT (3) 3.7 0.0037 P10.5 crx- retina AAAAACATAT 1.9 0.0019 P10.5 crx- retina CATACTAAAA (2) 1.9 0.0019 P10.5 crx- retina GCATTGCAAA (2) 1.9 0.0019 P10.5 crx- retina TGGTTTGCTG (5) 1.9 0.0019 P10.5 crx+ retina GCATTGCAAA (2) 13.5 0.0135 P10.5 crx+ retina CATACTAAAA (2) 1.9 0.0019 P10.5 crx+ retina CTTGAATATT 1.9 0.0019 P10.5 crx+ retina GTTACTTGTT 1.9 0.0019 P10.5 crx+ retina TGGTTTGCTG (5) 1.9 0.0019 P10.5 crx+ retina TTACTTGTTT (3) 1.9 0.0019 Adult retinal CATTCACTAG 5.6 0.0056 Adult retinal CATACTAAAA (2) 3.7 0.0037 Adult retinal GTTACTTGTT 3.7 0.0037 Adult retinal GCATTGCAAA (2) 1.9 0.0019 Adult retinal GGTTACTTGT (2) 1.9 0.0019 Adult retinal TGGTTTGCTG (5) 1.9 0.0019 ONL GCATTGCAAA (2) 5.7 0.0057