Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.294173	Gtf3c1	general transcription factor III C 1	7	7 61.0 cM	233863
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription | transcription factor activity | transcription factor complex
Human Homolog	GTF3C1[general transcription factor IIIC, polypeptide 1, alpha 220kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTGTGGCAC (5) 3.3 0.0033 P8 Cb GC TATTTATTTA (5) 3.3 0.0033 P8 Cb GC CAGACAAAAT (4) 1.6 0.0016 Cb medulloblastoma TATTTATTTA (5) 6.9 0.0069 Cb medulloblastoma GAACAGTGTG (8) 2.3 0.0023 Cb medulloblastoma TATTTATTTT (9) 2.3 0.0023 P8 GC+1d culture TATTTATTTA (5) 3.4 0.0034 P8 GC+1d culture CAGACAAAAT (4) 1.1 0.0011 P8 GC+1d culture GAACAGTGTG (8) 1.1 0.0011 P8 GC+SHH+1d culture GAACAGTGTG (8) 9.4 0.0094 P8 GC+SHH+1d culture CAGACAAAAT (4) 2.3 0.0023 P8 GC+SHH+1d culture TATTTATTTA (5) 1.2 0.0012 E15 cortex GCCTCTGCAC (2) 4.9 0.0049 P1 cortex TATTTATTTA (5) 13.6 0.0136 P1 cortex CAGACAAAAT (4) 4.5 0.0045 Hypothalamus GAACAGTGTG (8) 1.8 0.0018 Hypothalamus GCCTCTGCAC (2) 1.8 0.0018 Hypothalamus TATTTATTTA (5) 1.8 0.0018 E12.5 retina GAACAGTGTG (8) 5.6 0.0056 E12.5 retina GCCTCTGCAC (2) 1.9 0.0019 E12.5 retina GCTGTGGCAC (5) 1.9 0.0019 E14.5 retina TATTTATTTA (5) 9.1 0.0091 E14.5 retina GAACAGTGTG (8) 1.8 0.0018 E14.5 retina TATTTATTTT (9) 1.8 0.0018 E16.5 retina GAACAGTGTG (8) 7.2 0.0072 E16.5 retina TATTTATTTA (5) 3.6 0.0036 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina CAGACAAAAT (4) 1.8 0.0018 E18.5 retina CAGACAAAAT (4) 3.6 0.0036 E18.5 retina GAACAGTGTG (8) 3.6 0.0036 E18.5 retina TATTTATTTA (5) 1.8 0.0018 P0.5 retina GAACAGTGTG (8) 3.9 0.0039 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina TATTTATTTA (5) 2 0.002 P2.5 retina GAACAGTGTG (8) 3.5 0.0035 P2.5 retina CAGACAAAAT (4) 1.8 0.0018 P4.5 retina GAACAGTGTG (8) 2 0.002 P4.5 retina GCCTCTGCAC (2) 2 0.002 P4.5 retina TATTTATTTA (5) 2 0.002 P6.5 retina GCCTCTGCAC (2) 1.7 0.0017 P10.5 crx- retina TATTTATTTA (5) 7.4 0.0074 P10.5 crx- retina GCCTCTGCAC (2) 3.7 0.0037 P10.5 crx- retina GAACAGTGTG (8) 1.9 0.0019 P10.5 crx+ retina GCCTCTGCAC (2) 3.8 0.0038 P10.5 crx+ retina GAACAGTGTG (8) 1.9 0.0019 P10.5 crx+ retina TATTTATTTA (5) 1.9 0.0019 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal GAACAGTGTG (8) 1.9 0.0019 Adult retinal TATTTATTTT (9) 1.9 0.0019 ONL CAGACAAAAT (4) 1.9 0.0019 ONL GAACAGTGTG (8) 1.9 0.0019 ONL TATTTATTTA (5) 1.9 0.0019