Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29432
2510001I10Rik
RIKEN cDNA 2510001I10 gene
5
74781
Human Homolog
DKFZP434J154[WIPI49-like protein 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 75 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
GCTGTAAATT
3.3
0.0033
P8 Cb GC
TCCTGTGGGT
(
5
)
3.3
0.0033
P8 Cb GC
CTCCCTGCCC (
8
)
1.6
0.0016
P8 Cb GC
TGCCCACCAA
(
2
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
TCCTGTGGGT
(
5
)
11.6
0.0116
Cb medulloblastoma
TGCCCACCAA
(
2
)
9.2
0.0092
Cb medulloblastoma
CTCCCTGCCC (
8
)
2.3
0.0023
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
CTCCCTGCCC (
8
)
8
0.008
P8 GC+1d culture
TCCTGTGGGT
(
5
)
3.4
0.0034
P8 GC+1d culture
GCTGTAAATT
1.1
0.0011
P8 GC+1d culture
TGCCACCAAG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
CTCCCTGCCC (
8
)
9.4
0.0094
P8 GC+SHH+1d culture
TCCTGTGGGT
(
5
)
7
0.007
P8 GC+SHH+1d culture
TGCCCACCAA
(
2
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
CTCCCTGCCC (
8
)
7
0.007
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
CTCCCTGCCC (
8
)
19.8
0.0198
E15 cortex
CCCCCACACA
(
2
)
4.9
0.0049
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
CTCCCTGCCC (
8
)
9.1
0.0091
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
CCCCCACACA
(
2
)
1.8
0.0018
Hypothalamus
TCCTGTGGGT
(
5
)
1.8
0.0018
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
CTCCCTGCCC (
8
)
9.4
0.0094
E12.5 retina
TCCTGTGGGT
(
5
)
1.9
0.0019
E12.5 retina
TGCCCACCAA
(
2
)
1.9
0.0019
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
TCCTGTGGGT
(
5
)
5.5
0.0055
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
TCCTGTGGGT
(
5
)
5.4
0.0054
E16.5 retina
CTCCCTGCCC (
8
)
3.6
0.0036
E16.5 retina
TGCCCACCAA
(
2
)
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
CTCCCTGCCC (
8
)
5.5
0.0055
E18.5 retina
TCCTGTGGGT
(
5
)
3.6
0.0036
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
CTCCCTGCCC (
8
)
7.9
0.0079
P0.5 retina
CCCCCACACA
(
2
)
2
0.002
P0.5 retina
TCCTGTGGGT
(
5
)
2
0.002
P0.5 retina
TGCCACCAAG
(
4
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
CTCCCTGCCC (
8
)
7
0.007
P2.5 retina
TCCTGTGGGT
(
5
)
5.3
0.0053
P2.5 retina
TGCCACCAAG
(
4
)
1.8
0.0018
P2.5 retina
TGCCCACCAA
(
2
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
TCCTGTGGGT
(
5
)
9.9
0.0099
P4.5 retina
CTCCCTGCCC (
8
)
5.9
0.0059
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
CTCCCTGCCC (
8
)
8.3
0.0083
P6.5 retina
TACAACCTGG
(
4
)
3.3
0.0033
P6.5 retina
CATACAGAGC
(
2
)
1.7
0.0017
P6.5 retina
TCCTGTGGGT
(
5
)
1.7
0.0017
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
CTCCCTGCCC (
8
)
3.7
0.0037
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
CTCCCTGCCC (
8
)
1.9
0.0019
P10.5 crx+ retina
TCCTGTGGGT
(
5
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
CTCCCTGCCC (
8
)
3.7
0.0037
Adult retinal
TACAACCTGG
(
4
)
1.9
0.0019
Adult retinal
TCCTGTGGGT
(
5
)
1.9
0.0019
Adult retinal
TGCCACCAAG
(
4
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
TCCTGTGGGT
(
5
)
5.7
0.0057
ONL
CATACAGAGC
(
2
)
3.8
0.0038
ONL
CCCCCACACA
(
2
)
1.9
0.0019
ONL
CTCCCTGCCC (
8
)
1.9
0.0019
ONL
GCTGTAAATT
1.9
0.0019
