Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.294478	Commd7	COMM domain containing 7	2		99311
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	COMMD7[COMM domain containing 7]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC TAGTTGCTGG (7) 3.3 0.0033 P8 Cb GC GAGATCTCTC (3) 1.6 0.0016 P8 Cb GC GTGGCACAGG (10) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma TAGTTGCTGG (7) 4.6 0.0046 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture TAGTTGCTGG (7) 4.6 0.0046 P8 GC+1d culture GAGTGCCTCA (3) 3.4 0.0034 P8 GC+1d culture CCCTTCCCCC (3) 1.1 0.0011 P8 GC+1d culture GTGGCACAGG (10) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture TAGTTGCTGG (7) 7 0.007 P8 GC+SHH+1d culture GAGTGCCTCA (3) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GAGTGCCTCA (3) 7 0.007 3T3 fibroblasts GTGGCACAGG (10) 3.5 0.0035 3T3 fibroblasts TAGTTGCTGG (7) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GAGTGCCTCA (3) 4.9 0.0049 E15 cortex TAGTTGCTGG (7) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex TAGTTGCTGG (7) 9.1 0.0091 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus TAGTTGCTGG (7) 10.9 0.0109 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina TAGTTGCTGG (7) 3.8 0.0038 E12.5 retina GTGGCACAGG (10) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina TAGTTGCTGG (7) 76.5 0.0765 E14.5 retina CCCTTCCCCC (3) 1.8 0.0018 E14.5 retina GTGGCACAGG (10) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina TAGTTGCTGG (7) 36.2 0.0362 E16.5 retina GAGATCTCTC (3) 3.6 0.0036 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina TAGTTGCTGG (7) 7.3 0.0073 E18.5 retina GTGGCACAGG (10) 3.6 0.0036 E18.5 retina GAGATCTCTC (3) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GTGGCACAGG (10) 5.9 0.0059 P0.5 retina GAGTGCCTCA (3) 3.9 0.0039 P0.5 retina TAGTTGCTGG (7) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina TAGTTGCTGG (7) 5.3 0.0053 P2.5 retina CCCTTCCCCC (3) 1.8 0.0018 P2.5 retina GAGTGCCTCA (3) 1.8 0.0018 P2.5 retina GTGGCACAGG (10) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina TAGTTGCTGG (7) 5.9 0.0059 P4.5 retina GTGGCACAGG (10) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GAGATCTCTC (3) 1.7 0.0017 P6.5 retina GAGTGCCTCA (3) 1.7 0.0017 P6.5 retina GTGGCACAGG (10) 1.7 0.0017 P6.5 retina TAGTTGCTGG (7) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina TAGTTGCTGG (7) 13 0.013 P10.5 crx- retina GTGGCACAGG (10) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GTGGCACAGG (10) 9.6 0.0096 P10.5 crx+ retina TAGTTGCTGG (7) 5.8 0.0058 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal TAGTTGCTGG (7) 14.8 0.0148 Adult retinal GTGGCACAGG (10) 11.1 0.0111 Adult retinal GAGATCTCTC (3) 1.9 0.0019 Adult retinal GAGTGCCTCA (3) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL TAGTTGCTGG (7) 19.2 0.0192 ONL GAGTGCCTCA (3) 1.9 0.0019 ONL GTGGCACAGG (10) 1.9 0.0019