Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.294783	4933406P04Rik	RIKEN cDNA 4933406P04 gene	10		74420
Mm.294783	Bclaf1	BCL2-associated transcription factor 1	10		72567
Gene Ontology	DNA binding | negative regulation of transcription | nucleus | positive regulation of apoptosis | regulation of transcription, DNA-dependent | transcriptional repressor activity
Human Homolog	BCLAF1[BCL2-associated transcription factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 143 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC GAAAATAATG (3) 3.3 0.0033 P8 Cb GC GAAAATATGA (8) 3.3 0.0033 P8 Cb GC ACTCAATTCT (2) 1.6 0.0016 P8 Cb GC GCCTCTCTTG (8) 1.6 0.0016 P8 Cb GC TAGAGGAAGG (2) 1.6 0.0016 P8 Cb GC TGAAAATTAA (3) 1.6 0.0016 P8 Cb GC TGAAAGAACA (6) 1.6 0.0016 P8 Cb GC TTGACTTTGG (4) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma TGAAAATTAA (3) 4.6 0.0046 Cb medulloblastoma TGGAAAGAAC (3) 4.6 0.0046 Cb medulloblastoma ACTCAATTCT (2) 2.3 0.0023 Cb medulloblastoma GGCTTCTGGA (7) 2.3 0.0023 Cb medulloblastoma TGAAAGAACA (6) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture ACTCAATTCT (2) 3.4 0.0034 P8 GC+1d culture TGGTGGCTCA (9) 3.4 0.0034 P8 GC+1d culture GGCTTCTGGA (7) 2.3 0.0023 P8 GC+1d culture AGTCCATTTT (5) 1.1 0.0011 P8 GC+1d culture GAAAATAATG (3) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture AGTCCATTTT (5) 4.7 0.0047 P8 GC+SHH+1d culture TTGACTTTGG (4) 2.3 0.0023 P8 GC+SHH+1d culture GAAAATAATG (3) 1.2 0.0012 P8 GC+SHH+1d culture TAGAGGAAGG (2) 1.2 0.0012 P8 GC+SHH+1d culture TGAAAATTAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TGGTGGCTCA (9) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TGGTGGCTCA (9) 7 0.007 3T3 fibroblasts TGAAAGAACA (6) 3.5 0.0035 3T3 fibroblasts TTGACTTTGG (4) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TGGTGGCTCA (9) 4.9 0.0049 E15 cortex TTGACTTTGG (4) 4.9 0.0049 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex TGGAAAGAAC (3) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus GCCTCTCTTG (8) 3.6 0.0036 Hypothalamus TGAAAATTAA (3) 3.6 0.0036 Hypothalamus TGGTGGCTCA (9) 1.8 0.0018 Hypothalamus TTGACTTTGG (4) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina TGGTGGCTCA (9) 5.6 0.0056 E12.5 retina GAAAATAATG (3) 3.8 0.0038 E12.5 retina TTGACTTTGG (4) 3.8 0.0038 E12.5 retina ACTCAATTCT (2) 1.9 0.0019 E12.5 retina GGCTTCTGGA (7) 1.9 0.0019 E12.5 retina TGAAAATTAA (3) 1.9 0.0019 E12.5 retina TGTAATGAGA (4) 1.9 0.0019 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina ACTCAATTCT (2) 1.8 0.0018 E14.5 retina AGTCCATTTT (5) 1.8 0.0018 E14.5 retina TGAAAATTAA (3) 1.8 0.0018 E14.5 retina TGTAATGAGA (4) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina GAAAATAATG (3) 3.6 0.0036 E16.5 retina TGAAAATTAA (3) 3.6 0.0036 E16.5 retina ACTCAATTCT (2) 1.8 0.0018 E16.5 retina AGTCCATTTT (5) 1.8 0.0018 E16.5 retina TGGTGGCTCA (9) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina TGTAATGAGA (4) 7.3 0.0073 E18.5 retina TGGTGGCTCA (9) 5.5 0.0055 E18.5 retina TGAAAATTAA (3) 3.6 0.0036 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina ACTCAATTCT (2) 5.9 0.0059 P0.5 retina TTGACTTTGG (4) 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TGGTGGCTCA (9) 3.9 0.0039 P0.5 retina AGTCCATTTT (5) 2 0.002 P0.5 retina GGCTTCTGGA (7) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina TGAAAATTAA (3) 5.3 0.0053 P2.5 retina ACTCAATTCT (2) 1.8 0.0018 P2.5 retina GAAAATAATG (3) 1.8 0.0018 P2.5 retina GAAAATATGA (8) 1.8 0.0018 P2.5 retina GCCTCTCTTG (8) 1.8 0.0018 P2.5 retina GGCTTCTGGA (7) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TAGAGGAAGG (2) 1.8 0.0018 P2.5 retina TGGTGGCTCA (9) 1.8 0.0018 P2.5 retina TTGACTTTGG (4) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina GAAAATAATG (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TGTAATGAGA (4) 2 0.002 P4.5 retina TTGACTTTGG (4) 2 0.002 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TGAAAATTAA (3) 3.3 0.0033 P6.5 retina GAAAATAATG (3) 1.7 0.0017 P6.5 retina GAAAATATGA (8) 1.7 0.0017 P6.5 retina GGCTTCTGGA (7) 1.7 0.0017 P6.5 retina TGGTGGCTCA (9) 1.7 0.0017 P6.5 retina TTGACTTTGG (4) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina GAAAATAATG (3) 3.7 0.0037 P10.5 crx- retina TTGACTTTGG (4) 3.7 0.0037 P10.5 crx- retina ACTCAATTCT (2) 1.9 0.0019 P10.5 crx- retina AGTCCATTTT (5) 1.9 0.0019 P10.5 crx- retina TGAAAATTAA (3) 1.9 0.0019 P10.5 crx- retina TGAAAGAACA (6) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina AGTCCATTTT (5) 3.8 0.0038 P10.5 crx+ retina TGAAAATTAA (3) 3.8 0.0038 P10.5 crx+ retina ACTCAATTCT (2) 1.9 0.0019 P10.5 crx+ retina TAGAGGAAGG (2) 1.9 0.0019 P10.5 crx+ retina TGGTGGCTCA (9) 1.9 0.0019 P10.5 crx+ retina TGTAATGAGA (4) 1.9 0.0019 P10.5 crx+ retina TTGACTTTGG (4) 1.9 0.0019 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal TGGTGGCTCA (9) 3.7 0.0037 Adult retinal ACTCAATTCT (2) 1.9 0.0019 Adult retinal GAAAATAATG (3) 1.9 0.0019 Adult retinal GGCTTCTGGA (7) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TGAAAGAACA (6) 1.9 0.0019 Adult retinal TTGACTTTGG (4) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TGGTGGCTCA (9) 3.8 0.0038 ONL GAAAATATGA (8) 1.9 0.0019