Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.294783	4933406P04Rik	RIKEN cDNA 4933406P04 gene	10		74420
Mm.294783	Bclaf1	BCL2-associated transcription factor 1	10		72567
Gene Ontology	DNA binding | negative regulation of transcription | nucleus | positive regulation of apoptosis | regulation of transcription, DNA-dependent | transcriptional repressor activity
Human Homolog	BCLAF1[BCL2-associated transcription factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 143 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTCAATTCT (2) CAAAAAAAAA (2) GAAAAAAAAA (2) GAAAATAATG (3) GAAAATATGA (2) GCCTCTCTTG (3) TAGAGGAAGG (2) TGAAAATTAA TGAAAGAACA (4) TTGACTTTGG 109.2 0.1092 Cb medulloblastoma ACTCAATTCT (2) CAAAAAAAAA (2) GAAAAAAAAA (2) GGCTTCTGGA TGAAAATTAA TGAAAGAACA (4) TGGAAAGAAC 282 0.282 P8 GC+1d culture ACTCAATTCT (2) AGTCCATTTT (2) CAAAAAAAAA (2) GAAAAAAAAA (2) GAAAATAATG (3) GGCTTCTGGA TGGTGGCTCA 90.1 0.0901 P8 GC+SHH+1d culture AGTCCATTTT (2) CAAAAAAAAA (2) GAAAAAAAAA (2) GAAAATAATG (3) TAGAGGAAGG (2) TGAAAATTAA TGGTGGCTCA TTGACTTTGG 147.6 0.1476 3T3 fibroblasts GTCATAGCTG (2) TGAAAGAACA (4) TGGTGGCTCA TTGACTTTGG 24.5 0.0245 E15 cortex CAAAAAAAAA (2) GAAAAAAAAA (2) GTCATAGCTG (2) TGGTGGCTCA TTGACTTTGG 103.7 0.1037 P1 cortex CAAAAAAAAA (2) GAAAAAAAAA (2) TGGAAAGAAC 72.7 0.0727 Hypothalamus CAAAAAAAAA (2) GAAAAAAAAA (2) GCCTCTCTTG (3) TGAAAATTAA TGGTGGCTCA TTGACTTTGG 117.6 0.1176 E12.5 retina ACTCAATTCT (2) CAAAAAAAAA (2) GAAAAAAAAA (2) GAAAATAATG (3) GGCTTCTGGA TGAAAATTAA TGGTGGCTCA TGTAATGAGA (2) TTGACTTTGG 90.2 0.0902 E14.5 retina ACTCAATTCT (2) AGTCCATTTT (2) CAAAAAAAAA (2) GAAAAAAAAA (2) TGAAAATTAA TGTAATGAGA (2) 50.9 0.0509 E16.5 retina ACTCAATTCT (2) AGTCCATTTT (2) CAAAAAAAAA (2) GAAAAAAAAA (2) GAAAATAATG (3) TGAAAATTAA TGGTGGCTCA 45.2 0.0452 E18.5 retina CAAAAAAAAA (2) GAAAAAAAAA (2) TGAAAATTAA TGGTGGCTCA TGTAATGAGA (2) 123.7 0.1237 P0.5 retina ACTCAATTCT (2) AGTCCATTTT (2) CAAAAAAAAA (2) GAAAAAAAAA (2) GGCTTCTGGA GTCATAGCTG (2) TGGTGGCTCA TTGACTTTGG 196.3 0.1963 P2.5 retina ACTCAATTCT (2) CAAAAAAAAA (2) GAAAAAAAAA (2) GAAAATAATG (3) GAAAATATGA (2) GCCTCTCTTG (3) GGCTTCTGGA GTCATAGCTG (2) TAGAGGAAGG (2) TGAAAATTAA TGGTGGCTCA TTGACTTTGG 160.5 0.1605 P4.5 retina CAAAAAAAAA (2) GAAAAAAAAA (2) GAAAATAATG (3) GTCATAGCTG (2) TGTAATGAGA (2) TTGACTTTGG 101.1 0.1011 P6.5 retina CAAAAAAAAA (2) GAAAAAAAAA (2) GAAAATAATG (3) GAAAATATGA (2) GGCTTCTGGA GTCATAGCTG (2) TGAAAATTAA TGGTGGCTCA TTGACTTTGG 86.8 0.0868 P10.5 crx- retina ACTCAATTCT (2) AGTCCATTTT (2) CAAAAAAAAA (2) GAAAAAAAAA (2) GAAAATAATG (3) TGAAAATTAA TGAAAGAACA (4) TTGACTTTGG 44.7 0.0447 P10.5 crx+ retina ACTCAATTCT (2) AGTCCATTTT (2) CAAAAAAAAA (2) GAAAAAAAAA (2) TAGAGGAAGG (2) TGAAAATTAA TGGTGGCTCA TGTAATGAGA (2) TTGACTTTGG 92.1 0.0921 Adult retinal ACTCAATTCT (2) CAAAAAAAAA (2) GAAAAAAAAA (2) GAAAATAATG (3) GGCTTCTGGA GTCATAGCTG (2) TGAAAGAACA (4) TGGTGGCTCA TTGACTTTGG 52.2 0.0522 ONL CAAAAAAAAA (2) GAAAAAAAAA (2) GAAAATATGA (2) GTCATAGCTG (2) TGGTGGCTCA 53.5 0.0535