Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.294871	D8Ertd531e	DNA segment, Chr 8, ERATO Doi 531, expressed	8	8 22.0 cM	52348
Human Homolog	FLJ32642[hepatocellular carcinoma related protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 118 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC AACATAAAAA (4) 4.9 0.0049 P8 Cb GC TGTCTGCTTA (3) 3.3 0.0033 P8 Cb GC TTTCTGCTTA (2) 3.3 0.0033 P8 Cb GC TTTGGTGGGA 3.3 0.0033 P8 Cb GC ACACACACCT 1.6 0.0016 P8 Cb GC GTTGTAATTT (3) 1.6 0.0016 P8 Cb GC TTTTTCCCAA (4) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma AACATAAAAA (4) 4.6 0.0046 Cb medulloblastoma GAGGAATGCT 4.6 0.0046 Cb medulloblastoma TTTCTGCTTA (2) 4.6 0.0046 Cb medulloblastoma TTTGGTGGGA 4.6 0.0046 Cb medulloblastoma ACACACACCT 2.3 0.0023 Cb medulloblastoma ATGGTTGTAG 2.3 0.0023 Cb medulloblastoma TACCAGGTTT (4) 2.3 0.0023 Cb medulloblastoma TGTAGCTTCA 2.3 0.0023 Cb medulloblastoma TGTCTGCTTA (3) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TTTCTGCTTA (2) 10.3 0.0103 P8 GC+1d culture AACATAAAAA (4) 3.4 0.0034 P8 GC+1d culture TTTGGTGGGA 3.4 0.0034 P8 GC+1d culture ATGGTTGTAG 2.3 0.0023 P8 GC+1d culture GTTGTAATTT (3) 2.3 0.0023 P8 GC+1d culture TTTTTCCCAA (4) 2.3 0.0023 P8 GC+1d culture AACATACCTA 1.1 0.0011 P8 GC+1d culture GCAGCAGAGG 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture GTTGTAATTT (3) 7 0.007 P8 GC+SHH+1d culture ATGGTTGTAG 4.7 0.0047 P8 GC+SHH+1d culture TTTGGTGGGA 4.7 0.0047 P8 GC+SHH+1d culture AACATAAAAA (4) 3.5 0.0035 P8 GC+SHH+1d culture TTTCTGCTTA (2) 2.3 0.0023 P8 GC+SHH+1d culture TACCAGGTTT (4) 1.2 0.0012 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts TTTGGTGGGA 7 0.007 3T3 fibroblasts TACCAGGTTT (4) 3.5 0.0035 3T3 fibroblasts TTTCTGCTTA (2) 3.5 0.0035 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex GAGGAATGCT 4.9 0.0049 E15 cortex GCAGCAGAGG 4.9 0.0049 E15 cortex TTTGGTGGGA 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex TTTCTGCTTA (2) 9.1 0.0091 P1 cortex ATGGTTGTAG 4.5 0.0045 P1 cortex TTTTTCCCAA (4) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus ATGGTTGTAG 3.6 0.0036 Hypothalamus GACTACTGGA (3) 3.6 0.0036 Hypothalamus AACATACCTA 1.8 0.0018 Hypothalamus TTTGGTGGGA 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TACCAGGTTT (4) 3.8 0.0038 E12.5 retina TTTCTGCTTA (2) 3.8 0.0038 E12.5 retina AACATAAAAA (4) 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina AACATAAAAA (4) 3.6 0.0036 E14.5 retina GAGGAATGCT 1.8 0.0018 E14.5 retina TTTCTGCTTA (2) 1.8 0.0018 E14.5 retina TTTGGTGGGA 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TACCAGGTTT (4) 3.6 0.0036 E16.5 retina TTTCTGCTTA (2) 3.6 0.0036 E16.5 retina TTTGGTGGGA 3.6 0.0036 E16.5 retina ACACACACCT 1.8 0.0018 E16.5 retina TGTCTGCTTA (3) 1.8 0.0018 E16.5 retina TTTTTCCCAA (4) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina AACATAAAAA (4) 3.6 0.0036 E18.5 retina TACCAGGTTT (4) 3.6 0.0036 E18.5 retina ATGGTTGTAG 1.8 0.0018 E18.5 retina TTTCTGCTTA (2) 1.8 0.0018 E18.5 retina TTTTTCCCAA (4) 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina GTTGTAATTT (3) 7.9 0.0079 P0.5 retina AACATAAAAA (4) 2 0.002 P0.5 retina ACACACACCT 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TTTGGTGGGA 10.6 0.0106 P2.5 retina TGTCTGCTTA (3) 3.5 0.0035 P2.5 retina TTTCTGCTTA (2) 3.5 0.0035 P2.5 retina AACATAAAAA (4) 1.8 0.0018 P2.5 retina ACACACACCT 1.8 0.0018 P2.5 retina ATGGTTGTAG 1.8 0.0018 P2.5 retina TACCAGGTTT (4) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina TTTGGTGGGA 7.9 0.0079 P4.5 retina TTTCTGCTTA (2) 5.9 0.0059 P4.5 retina ATGGTTGTAG 4 0.004 P4.5 retina GTTGTAATTT (3) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina ATGGTTGTAG 6.7 0.0067 P6.5 retina TTTCTGCTTA (2) 1.7 0.0017 P6.5 retina TTTGGTGGGA 1.7 0.0017 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina ATGGTTGTAG 1.9 0.0019 P10.5 crx- retina GACTACTGGA (3) 1.9 0.0019 P10.5 crx- retina TACCAGGTTT (4) 1.9 0.0019 P10.5 crx- retina TTTCTGCTTA (2) 1.9 0.0019 P10.5 crx- retina TTTGGTGGGA 1.9 0.0019 P10.5 crx- retina TTTTTCCCAA (4) 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina ATGGTTGTAG 9.6 0.0096 P10.5 crx+ retina ACACACACCT 1.9 0.0019 P10.5 crx+ retina TGTCTGCTTA (3) 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal ACACACACCT 3.7 0.0037 Adult retinal ATGGTTGTAG 3.7 0.0037 Adult retinal TGTAGCTTCA 3.7 0.0037 Adult retinal GACTACTGGA (3) 1.9 0.0019 Adult retinal TGTCTGCTTA (3) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL AACATAAAAA (4) 1.9 0.0019 ONL AACATACCTA 1.9 0.0019 ONL GCAGCAGAGG 1.9 0.0019 ONL GTTGTAATTT (3) 1.9 0.0019 ONL TGTCTGCTTA (3) 1.9 0.0019 ONL TTTGGTGGGA 1.9 0.0019