Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29495	8030479D07Rik	RIKEN cDNA 8030479D07 gene	2		77544
Mm.29495	Cugbp1	CUG triplet repeat, RNA binding protein 1	2	2 47.5 cM	13046
Gene Ontology	cytoplasm | mRNA processing | mRNA splice site selection | nucleus | pre-mRNA splicing factor activity | RNA binding
Human Homolog	CUGBP1[CUG triplet repeat, RNA binding protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAGAGCCTG (2) 3.3 0.0033 P8 Cb GC AAACATACAC (2) 1.6 0.0016 P8 Cb GC CCGTGTGGTG (2) 1.6 0.0016 P8 Cb GC CTAGGCGCTG (2) 1.6 0.0016 P8 Cb GC TTTCCTGCTG (2) 1.6 0.0016 Cb medulloblastoma AGAGAGCCTG (2) 4.6 0.0046 Cb medulloblastoma TTGTATCTGC (3) 4.6 0.0046 Cb medulloblastoma TCTGTTGGCT (2) 2.3 0.0023 P8 GC+1d culture AGAGAGCCTG (2) 2.3 0.0023 P8 GC+1d culture CCGTGTGGTG (2) 1.1 0.0011 P8 GC+1d culture CTAGGCGCTG (2) 1.1 0.0011 P8 GC+1d culture TTGTATCTGC (3) 1.1 0.0011 P8 GC+1d culture TTTAAGAGGA (3) 1.1 0.0011 P8 GC+SHH+1d culture AGAGAGCCTG (2) 3.5 0.0035 P8 GC+SHH+1d culture TCGATGTGGC (2) 2.3 0.0023 P8 GC+SHH+1d culture AAACATACAC (2) 1.2 0.0012 P8 GC+SHH+1d culture TGCTAGTAGG (2) 1.2 0.0012 P8 GC+SHH+1d culture TTGTATCTGC (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTAAGAGGA (3) 1.2 0.0012 3T3 fibroblasts AGAGAGCCTG (2) 3.5 0.0035 3T3 fibroblasts TCGATGTGGC (2) 3.5 0.0035 E15 cortex AGAGAGCCTG (2) 9.9 0.0099 E15 cortex TCGATGTGGC (2) 9.9 0.0099 E15 cortex CCGTGTGGTG (2) 4.9 0.0049 P1 cortex AAACATACAC (2) 9.1 0.0091 Hypothalamus TTTAAGAGGA (3) 3.6 0.0036 Hypothalamus TGCAAAAGTT (2) 1.8 0.0018 Hypothalamus TTGTATCTGC (3) 1.8 0.0018 E12.5 retina TCGATGTGGC (2) 3.8 0.0038 E12.5 retina TTTAAGAGGA (3) 3.8 0.0038 E12.5 retina TGCAAAAGTT (2) 1.9 0.0019 E12.5 retina TGCTAGTAGG (2) 1.9 0.0019 E16.5 retina AGAGAGCCTG (2) 1.8 0.0018 E16.5 retina CTAGGCGCTG (2) 1.8 0.0018 E16.5 retina TTGTATCTGC (3) 1.8 0.0018 E16.5 retina TTTAAGAGGA (3) 1.8 0.0018 E18.5 retina CCGTGTGGTG (2) 1.8 0.0018 E18.5 retina TCGATGTGGC (2) 1.8 0.0018 E18.5 retina TCTGTTGGCT (2) 1.8 0.0018 E18.5 retina TGCAAAAGTT (2) 1.8 0.0018 E18.5 retina TTGTATCTGC (3) 1.8 0.0018 P0.5 retina AAACATACAC (2) 2 0.002 P0.5 retina AGAGAGCCTG (2) 2 0.002 P0.5 retina TCGATGTGGC (2) 2 0.002 P0.5 retina TCTGTTGGCT (2) 2 0.002 P2.5 retina AGAGAGCCTG (2) 3.5 0.0035 P2.5 retina TCTGTTGGCT (2) 1.8 0.0018 P2.5 retina TGCTAGTAGG (2) 1.8 0.0018 P4.5 retina TTTAAGAGGA (3) 4 0.004 P4.5 retina AAACATACAC (2) 2 0.002 P4.5 retina AGAGAGCCTG (2) 2 0.002 P4.5 retina CTAGGCGCTG (2) 2 0.002 P6.5 retina AGAGAGCCTG (2) 1.7 0.0017 P6.5 retina TCGATGTGGC (2) 1.7 0.0017 P10.5 crx- retina AGAGAGCCTG (2) 3.7 0.0037 P10.5 crx- retina TCTGTTGGCT (2) 1.9 0.0019 P10.5 crx- retina TGCTAGTAGG (2) 1.9 0.0019 P10.5 crx- retina TTGTATCTGC (3) 1.9 0.0019 Adult retinal GGGACAAAAG (5) 5.6 0.0056 Adult retinal TTTAAGAGGA (3) 3.7 0.0037 Adult retinal TTGTATCTGC (3) 1.9 0.0019 ONL TGCTAGTAGG (2) 3.8 0.0038 ONL AGAGAGCCTG (2) 1.9 0.0019 ONL TCGATGTGGC (2) 1.9 0.0019