Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.294975
1110033C18Rik
RIKEN cDNA 1110033C18 gene
10
10 C1
102115
Human Homolog
MGC4293[hypothetical protein MGC4293]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 5 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 65 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AATAAAATAA
(
2
)
6.5
0.0065
P8 Cb GC
TGCAAGACCC (
6
)
4.9
0.0049
Cb medulloblastoma
AATAAAATAA
(
2
)
2.3
0.0023
Cb medulloblastoma
ACATAAATAA (
4
)
2.3
0.0023
P8 GC+1d culture
AATAAAATAA
(
2
)
4.6
0.0046
P8 GC+1d culture
ACATAAATAA (
4
)
2.3
0.0023
P8 GC+1d culture
AAATAAAAAT (
15
)
1.1
0.0011
P8 GC+1d culture
CCCTCCACCA
(
2
)
1.1
0.0011
P8 GC+1d culture
GTGCGGCAGA (
2
)
1.1
0.0011
P8 GC+1d culture
TAGCCTAGGC
(
10
)
1.1
0.0011
P8 GC+1d culture
TGCAAGACCC (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
AATAAAATAA
(
2
)
7
0.007
P8 GC+SHH+1d culture
ACATAAATAA (
4
)
4.7
0.0047
P8 GC+SHH+1d culture
TGCAAGACCC (
6
)
4.7
0.0047
P8 GC+SHH+1d culture
TAGCCTAGGC
(
10
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGCGGCAGA (
2
)
1.2
0.0012
3T3 fibroblasts
TGCAAGACCC (
6
)
7
0.007
E15 cortex
AATAAAATAA
(
2
)
4.9
0.0049
E15 cortex
CCCTCCACCA
(
2
)
4.9
0.0049
P1 cortex
AATAAAATAA
(
2
)
13.6
0.0136
P1 cortex
TGCAAGACCC (
6
)
4.5
0.0045
Hypothalamus
AATAAAATAA
(
2
)
3.6
0.0036
Hypothalamus
ACATAAATAA (
4
)
3.6
0.0036
Hypothalamus
AAATAAAAAT (
15
)
1.8
0.0018
Hypothalamus
GTGCGGCAGA (
2
)
1.8
0.0018
E12.5 retina
ACATAAATAA (
4
)
5.6
0.0056
E12.5 retina
AATAAAATAA
(
2
)
1.9
0.0019
E14.5 retina
AATAAAATAA
(
2
)
10.9
0.0109
E14.5 retina
TGCAAGACCC (
6
)
3.6
0.0036
E14.5 retina
ACATAAATAA (
4
)
1.8
0.0018
E16.5 retina
ACATAAATAA (
4
)
7.2
0.0072
E16.5 retina
AATAAAATAA
(
2
)
5.4
0.0054
E16.5 retina
TAGCCTAGGC
(
10
)
3.6
0.0036
E16.5 retina
AAATAAAAAT (
15
)
1.8
0.0018
E16.5 retina
TGCAAGACCC (
6
)
1.8
0.0018
E18.5 retina
ACATAAATAA (
4
)
7.3
0.0073
P0.5 retina
TAGCCTAGGC
(
10
)
3.9
0.0039
P0.5 retina
TGCAAGACCC (
6
)
3.9
0.0039
P0.5 retina
AATAAAATAA
(
2
)
2
0.002
P0.5 retina
ACATAAATAA (
4
)
2
0.002
P2.5 retina
ACATAAATAA (
4
)
8.8
0.0088
P2.5 retina
AATAAAATAA
(
2
)
5.3
0.0053
P2.5 retina
AAATAAAAAT (
15
)
1.8
0.0018
P2.5 retina
TGCAAGACCC (
6
)
1.8
0.0018
P4.5 retina
ACATAAATAA (
4
)
11.9
0.0119
P4.5 retina
AATAAAATAA
(
2
)
9.9
0.0099
P4.5 retina
AAATAAAAAT (
15
)
4
0.004
P4.5 retina
TAGCCTAGGC
(
10
)
4
0.004
P6.5 retina
AATAAAATAA
(
2
)
10
0.01
P6.5 retina
AAATAAAAAT (
15
)
1.7
0.0017
P6.5 retina
TAGCCTAGGC
(
10
)
1.7
0.0017
P6.5 retina
TGCAAGACCC (
6
)
1.7
0.0017
P10.5 crx- retina
AATAAAATAA
(
2
)
9.3
0.0093
P10.5 crx- retina
AAATAAAAAT (
15
)
1.9
0.0019
P10.5 crx- retina
ACATAAATAA (
4
)
1.9
0.0019
P10.5 crx- retina
TGCAAGACCC (
6
)
1.9
0.0019
P10.5 crx+ retina
AATAAAATAA
(
2
)
1.9
0.0019
P10.5 crx+ retina
ACATAAATAA (
4
)
1.9
0.0019
Adult retinal
TAGCCTAGGC
(
10
)
22.2
0.0222
Adult retinal
ACATAAATAA (
4
)
1.9
0.0019
Adult retinal
CCCTCCACCA
(
2
)
1.9
0.0019
Adult retinal
TGCAAGACCC (
6
)
1.9
0.0019
ONL
TAGCCTAGGC
(
10
)
13.4
0.0134
ONL
AAATAAAAAT (
15
)
11.5
0.0115
ONL
AATAAAATAA
(
2
)
5.7
0.0057
