Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29515	Pxk	PX domain containing serine/threonine kinase	14	14 5.0 cM	218699
Gene Ontology	ATP binding | intracellular signaling cascade | kinase activity | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity
Human Homolog	PXK[PX domain containing serine/threonine kinase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 87 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGATGCCTG (2) 11.4 0.0114 P8 Cb GC GACCGTGAGT (2) 3.3 0.0033 P8 Cb GC TCACTAAAAA (3) 3.3 0.0033 P8 Cb GC GGTCTGAGGA (4) 1.6 0.0016 Cb medulloblastoma GAGATGCCTG (2) 13.9 0.0139 Cb medulloblastoma TCACTAAAAA (3) 6.9 0.0069 Cb medulloblastoma TCACGAAAAA (3) 4.6 0.0046 Cb medulloblastoma GACCGTGAGT (2) 2.3 0.0023 P8 GC+1d culture GAGATGCCTG (2) 13.7 0.0137 P8 GC+1d culture TCACTAAAAA (3) 4.6 0.0046 P8 GC+1d culture GGTCTGAGGA (4) 3.4 0.0034 P8 GC+1d culture GACCGTGAGT (2) 2.3 0.0023 P8 GC+1d culture TCACGAAAGT (2) 1.1 0.0011 P8 GC+1d culture TCACTAAGTA (2) 1.1 0.0011 P8 GC+1d culture TGTGCCACCC (4) 1.1 0.0011 P8 GC+SHH+1d culture GAGATGCCTG (2) 12.9 0.0129 P8 GC+SHH+1d culture GACCGTGAGT (2) 2.3 0.0023 P8 GC+SHH+1d culture TCACTAAGTA (2) 2.3 0.0023 P8 GC+SHH+1d culture TCACTAAAAA (3) 1.2 0.0012 3T3 fibroblasts GAGATGCCTG (2) 31.5 0.0315 3T3 fibroblasts GGTCTGAGGA (4) 7 0.007 3T3 fibroblasts TGTGCCACCC (4) 3.5 0.0035 E15 cortex GGTCTGAGGA (4) 9.9 0.0099 E15 cortex GAGATGCCTG (2) 4.9 0.0049 P1 cortex GAGATGCCTG (2) 4.5 0.0045 Hypothalamus GAGATGCCTG (2) 18.1 0.0181 Hypothalamus GGTCTGAGGA (4) 3.6 0.0036 Hypothalamus TCACGAAAAA (3) 3.6 0.0036 Hypothalamus TCACGAAAGT (2) 1.8 0.0018 E12.5 retina GAGATGCCTG (2) 7.5 0.0075 E12.5 retina GGTCTGAGGA (4) 3.8 0.0038 E12.5 retina TCACGAAAGT (2) 1.9 0.0019 E14.5 retina GAGATGCCTG (2) 20 0.02 E14.5 retina TCACGAAAAA (3) 1.8 0.0018 E16.5 retina GAGATGCCTG (2) 23.5 0.0235 E16.5 retina ATTTATTTTA (3) 3.6 0.0036 E16.5 retina TCACGAAAAA (3) 3.6 0.0036 E16.5 retina GACCGTGAGT (2) 1.8 0.0018 E16.5 retina TCACTAAAAA (3) 1.8 0.0018 E18.5 retina GAGATGCCTG (2) 10.9 0.0109 E18.5 retina GACCGTGAGT (2) 5.5 0.0055 E18.5 retina TCACGAAAAA (3) 3.6 0.0036 E18.5 retina TCACTAAAAA (3) 3.6 0.0036 E18.5 retina TCACGAAAGT (2) 1.8 0.0018 P0.5 retina GAGATGCCTG (2) 23.6 0.0236 P0.5 retina TGTGCCACCC (4) 2 0.002 P2.5 retina GAGATGCCTG (2) 15.8 0.0158 P2.5 retina GGTCTGAGGA (4) 7 0.007 P2.5 retina TCACGAAAAA (3) 7 0.007 P2.5 retina GACCGTGAGT (2) 1.8 0.0018 P2.5 retina TCACGAAAGT (2) 1.8 0.0018 P4.5 retina GAGATGCCTG (2) 17.8 0.0178 P4.5 retina TCACGAAAAA (3) 5.9 0.0059 P4.5 retina GGTCTGAGGA (4) 4 0.004 P4.5 retina TCACTAAAAA (3) 4 0.004 P4.5 retina GACCGTGAGT (2) 2 0.002 P4.5 retina TCACGAAAGT (2) 2 0.002 P4.5 retina TCACTAAGTA (2) 2 0.002 P6.5 retina GAGATGCCTG (2) 11.7 0.0117 P6.5 retina TCACGAAAAA (3) 6.7 0.0067 P6.5 retina GGTCTGAGGA (4) 5 0.005 P6.5 retina TCACGAAAGT (2) 5 0.005 P6.5 retina TCACTAAAAA (3) 3.3 0.0033 P6.5 retina ATTTATTTTA (3) 1.7 0.0017 P10.5 crx- retina GAGATGCCTG (2) 22.3 0.0223 P10.5 crx- retina TCACGAAAAA (3) 3.7 0.0037 P10.5 crx- retina ATTTATTTTA (3) 1.9 0.0019 P10.5 crx- retina GACCGTGAGT (2) 1.9 0.0019 P10.5 crx- retina TCACGAAAGT (2) 1.9 0.0019 P10.5 crx- retina TCACTAAAAA (3) 1.9 0.0019 P10.5 crx- retina TGTGCCACCC (4) 1.9 0.0019 P10.5 crx+ retina GAGATGCCTG (2) 15.4 0.0154 P10.5 crx+ retina TCACGAAAGT (2) 5.8 0.0058 P10.5 crx+ retina TCACGAAAAA (3) 3.8 0.0038 P10.5 crx+ retina TCACTAAAAA (3) 3.8 0.0038 P10.5 crx+ retina ATTTATTTTA (3) 1.9 0.0019 P10.5 crx+ retina GACCGTGAGT (2) 1.9 0.0019 Adult retinal GAGATGCCTG (2) 18.5 0.0185 Adult retinal TCACGAAAGT (2) 5.6 0.0056 Adult retinal GGTCTGAGGA (4) 1.9 0.0019 Adult retinal TCACGAAAAA (3) 1.9 0.0019 ONL GAGATGCCTG (2) 15.3 0.0153 ONL TCACGAAAAA (3) 5.7 0.0057 ONL GACCGTGAGT (2) 3.8 0.0038 ONL GGTCTGAGGA (4) 1.9 0.0019 ONL TCACGAAAGT (2) 1.9 0.0019 ONL TCACTAAAAA (3) 1.9 0.0019