Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29542	U2af1-rs1	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, related sequence 1	11	11 12.0 cM	22183
Gene Ontology	nucleic acid binding | nucleus | ribonucleoprotein complex | RNA binding
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAGCCTT (2) 4.9 0.0049 P8 Cb GC TATACAATGT (2) 1.6 0.0016 P8 Cb GC TTGTTTTCCT (6) 1.6 0.0016 Cb medulloblastoma TTGTTTTCCT (6) 6.9 0.0069 Cb medulloblastoma AAAGTCTTCA (2) 2.3 0.0023 P8 GC+1d culture TTGTTTTCCT (6) 2.3 0.0023 P8 GC+1d culture AAAGTCTTCA (2) 1.1 0.0011 P8 GC+1d culture GAAAAGCCTT (2) 1.1 0.0011 P8 GC+SHH+1d culture TTGTTTTCCT (6) 3.5 0.0035 P8 GC+SHH+1d culture AAAGTCTTCA (2) 2.3 0.0023 P8 GC+SHH+1d culture TATACAATGT (2) 2.3 0.0023 3T3 fibroblasts GAAAAGCCTT (2) 7 0.007 E15 cortex AAGAGTGGCT (2) 4.9 0.0049 P1 cortex GAAAAGCCTT (2) 9.1 0.0091 Hypothalamus TTGTTTTCCT (6) 12.7 0.0127 Hypothalamus TATACAATGT (2) 3.6 0.0036 Hypothalamus GAAAAGCCTT (2) 1.8 0.0018 E12.5 retina GAAAAGCCTT (2) 1.9 0.0019 E14.5 retina TTGTTTTCCT (6) 5.5 0.0055 E14.5 retina AAAGTCTTCA (2) 1.8 0.0018 E14.5 retina GAAAAGCCTT (2) 1.8 0.0018 E16.5 retina TTGTTTTCCT (6) 5.4 0.0054 E16.5 retina GAAAAGCCTT (2) 1.8 0.0018 E16.5 retina TATACAATGT (2) 1.8 0.0018 E18.5 retina GAAAAGCCTT (2) 1.8 0.0018 P0.5 retina AAAGTCTTCA (2) 2 0.002 P0.5 retina GAAAAGCCTT (2) 2 0.002 P0.5 retina TTGTTTTCCT (6) 2 0.002 P2.5 retina TTGTTTTCCT (6) 3.5 0.0035 P2.5 retina GAAAAGCCTT (2) 1.8 0.0018 P4.5 retina AAAGTCTTCA (2) 2 0.002 P4.5 retina AAGAGTGGCT (2) 2 0.002 P4.5 retina TTGTTTTCCT (6) 2 0.002 P6.5 retina TTGTTTTCCT (6) 5 0.005 P6.5 retina TATACAATGT (2) 3.3 0.0033 P10.5 crx- retina GAAAAGCCTT (2) 7.4 0.0074 P10.5 crx- retina TTGTTTTCCT (6) 3.7 0.0037 P10.5 crx- retina AAAGTCTTCA (2) 1.9 0.0019 P10.5 crx- retina TATACAATGT (2) 1.9 0.0019 P10.5 crx+ retina AAAGTCTTCA (2) 3.8 0.0038 P10.5 crx+ retina TTGTTTTCCT (6) 3.8 0.0038 P10.5 crx+ retina TATACAATGT (2) 1.9 0.0019 Adult retinal TTGTTTTCCT (6) 9.3 0.0093 Adult retinal AAGAGTGGCT (2) 1.9 0.0019 Adult retinal GAAAAGCCTT (2) 1.9 0.0019 ONL TTGTTTTCCT (6) 5.7 0.0057 ONL TATACAATGT (2) 3.8 0.0038 ONL AAAGTCTTCA (2) 1.9 0.0019