Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.295533	Flna	filamin, alpha	X	X 29.8 cM	192176
Gene Ontology	actin binding | actin binding | cytoskeleton | early endosome to late endosome transport | Golgi trans face | protein binding | protein kinase C binding
Human Homolog	FLNA[filamin A, alpha (actin binding protein 280)] | FLNA[filamin A, alpha (actin binding protein 280)] | FLNA[filamin A, alpha (actin binding protein 280)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 132 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATAATACCTA ATGGCACATA GAAATGAGCA GATTGAGAAT (7) GGGAAAAAAA (5) GGGTGGCCAG TCTTCTGTGG TCTTCTTTGG (2) 44 0.044 Cb medulloblastoma AAGGAGTTAC GAAATGAGCA GATTGAGAAT (7) GGGAAAAAAA (5) GTGCCTGGGC (2) TCTTCTGTGG 131.7 0.1317 P8 GC+1d culture AAGGAGTTAC ATGGCACATA GAAATGAGCA GATTGAGAAT (7) GGGAAAAAAA (5) GTGCCTGGGC (2) TCTTCTGTGG TCTTCTTTGG (2) TGGGCAAGGC 48.9 0.0489 P8 GC+SHH+1d culture AAGGAGTTAC ATGGCACATA GAAATGAGCA GATTGAGAAT (7) GGGAAAAAAA (5) GTGCCTGGGC (2) TCTTCTGTGG TCTTCTTTGG (2) 61 0.061 3T3 fibroblasts GTGCCTGGGC (2) TCTTCTGTGG TCTTCTTTGG (2) 14 0.014 E15 cortex GCTGCTGGAG TGGGCAAGGC 14.8 0.0148 P1 cortex ATGGCACATA GGGAAAAAAA (5) TCTTCTGTGG TCTTCTTTGG (2) TTTTCTTTGG (3) 27.1 0.0271 Hypothalamus AAAAAATTCA (2) AAGGAGTTAC ATAATACCTA ATGGCACATA GATTGAGAAT (7) GGGAAAAAAA (5) GTGCCTGGGC (2) TCTTCTGTGG 74.2 0.0742 E12.5 retina AAGGAGTTAC ATAATACCTA GAAATGAGCA GGAACTCCTA (2) TCTTCTGTGG TCTTCTTTGG (2) TTTTCTTTGG (3) 47 0.047 E14.5 retina AAAAAATTCA (2) AAGGAGTTAC ATGGCACATA GAAATGAGCA GATTGAGAAT (7) GGGAAAAAAA (5) TCTTCTGTGG TCTTCTTTGG (2) 47.3 0.0473 E16.5 retina GAAATGAGCA GATTGAGAAT (7) GGGAAAAAAA (5) TCTTCTGTGG TCTTCTTTGG (2) 23.5 0.0235 E18.5 retina AAAAAATTCA (2) AAGGAGTTAC GAAATGAGCA GATTGAGAAT (7) GGGAAAAAAA (5) GTGCCTGGGC (2) TCTTCTGTGG TCTTCTTTGG (2) TTTTCTTTGG (3) 43.5 0.0435 P0.5 retina ATGGCACATA GAAATGAGCA GATTGAGAAT (7) GGGAAAAAAA (5) GTGCCTGGGC (2) TCTTCTGTGG TCTTCTTTGG (2) TGGGCAAGGC 27.6 0.0276 P2.5 retina GATTGAGAAT (7) GCTGCTGGAG GGGAAAAAAA (5) GTGCCTGGGC (2) TCTTCTGTGG TCTTCTTTGG (2) TTTTCTTTGG (3) 30 0.03 P4.5 retina GAAATGAGCA GATTGAGAAT (7) GGGAAAAAAA (5) GTGCCTGGGC (2) TCTTCTTTGG (2) 27.8 0.0278 P6.5 retina AAGGAGTTAC ATAATACCTA GAAATGAGCA GGAACTCCTA (2) GGGAAAAAAA (5) GTGCCTGGGC (2) TCTTCTGTGG TCTTCTTTGG (2) 49.9 0.0499 P10.5 crx- retina GAAATGAGCA GATTGAGAAT (7) GGGAAAAAAA (5) GTGCCTGGGC (2) TCTTCTGTGG TCTTCTTTGG (2) 35.3 0.0353 P10.5 crx+ retina ATGGCACATA GATTGAGAAT (7) GGGAAAAAAA (5) GGGTGGCCAG GTGCCTGGGC (2) TCTTCTGTGG 48 0.048 Adult retinal CAGTGTCTCT (2) GATTGAGAAT (7) GGGAAAAAAA (5) GGGTGGCCAG GTGCCTGGGC (2) TCTTCTTTGG (2) TTTTCTTTGG (3) 55.7 0.0557 ONL CAGTGTCTCT (2) GAAATGAGCA GATTGAGAAT (7) GGGAAAAAAA (5) GTGCCTGGGC (2) TCTTCTGTGG TCTTCTTTGG (2) 49.6 0.0496