Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29564	Mmp2	matrix metalloproteinase 2	8	8 44.0 cM	17390
Gene Ontology	calcium ion binding | collagen catabolism | extracellular matrix | extracellular space | gelatinase A activity | hydrolase activity | metalloendopeptidase activity | metallopeptidase activity | proteolysis and peptidolysis | zinc ion binding
Human Homolog	MMP2[matrix metalloproteinase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 21 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAAATGGCA 1.6 0.0016 P8 Cb GC GGGAATGGCA (2) 1.6 0.0016 Cb medulloblastoma GGAAATGGCA 2.3 0.0023 P8 GC+1d culture CCTTTGCCCC (2) 4.6 0.0046 P8 GC+1d culture GGAAATGGCA 4.6 0.0046 P8 GC+SHH+1d culture GGAAATGGCA 4.7 0.0047 P8 GC+SHH+1d culture CCTTTGCCCC (2) 1.2 0.0012 3T3 fibroblasts GGAAATGGCA 14 0.014 E15 cortex CCTTTGCCCC (2) 4.9 0.0049 E15 cortex GGGAATGGCA (2) 4.9 0.0049 P1 cortex CCTTTGCCCC (2) 4.5 0.0045 E14.5 retina CCTTTGCCCC (2) 1.8 0.0018 E16.5 retina GGAAATGGCA 5.4 0.0054 P0.5 retina GGAAATGGCA 3.9 0.0039 P6.5 retina GGAAATGGCA 3.3 0.0033 P6.5 retina CCTTTGCCCC (2) 1.7 0.0017 P10.5 crx- retina GGAAATGGCA 1.9 0.0019 P10.5 crx+ retina GGAAATGGCA 1.9 0.0019 Adult retinal CCTTTGCCCC (2) 5.6 0.0056 Adult retinal GGAAATGGCA 1.9 0.0019 ONL GGGAATGGCA (2) 1.9 0.0019