Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.295742	Hnrpm	heterogeneous nuclear ribonucleoprotein M	17		76936
Gene Ontology	integral to plasma membrane | membrane fraction | nucleus | plasma membrane | ribonucleoprotein complex | RNA binding | transmembrane receptor activity | viral nucleocapsid
Human Homolog	HNRPM[heterogeneous nuclear ribonucleoprotein M]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 144 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCTGAGTG (4) 11.4 0.0114 P8 Cb GC CGCCATTTTT (3) 1.6 0.0016 P8 Cb GC GAAGATGCTA (2) 1.6 0.0016 P8 Cb GC GCATTCATCA (2) 1.6 0.0016 P8 Cb GC GCCTGTATGA (2) 1.6 0.0016 P8 Cb GC GGAAGGGGAA (5) 1.6 0.0016 P8 Cb GC TGTATCTTTT (9) 1.6 0.0016 Cb medulloblastoma CGCCATTTTT (3) 4.6 0.0046 Cb medulloblastoma GGAAGGGGAA (5) 4.6 0.0046 Cb medulloblastoma CCTCCACCCA (7) 2.3 0.0023 Cb medulloblastoma GAAGAGGGAA (5) 2.3 0.0023 Cb medulloblastoma TAAAATCAAA (2) 2.3 0.0023 P8 GC+1d culture AAGCTGAGTG (4) 19.4 0.0194 P8 GC+1d culture GCATTCATCA (2) 2.3 0.0023 P8 GC+1d culture GGGTGGGAAA (4) 2.3 0.0023 P8 GC+1d culture CTGAAGCAGT (5) 1.1 0.0011 P8 GC+1d culture CTTGGAGAAC (3) 1.1 0.0011 P8 GC+1d culture GAAGGACCCT (4) 1.1 0.0011 P8 GC+1d culture GATGTGGGTG (13) 1.1 0.0011 P8 GC+1d culture GCCTGTATGA (2) 1.1 0.0011 P8 GC+1d culture GCCTGTGTAA (3) 1.1 0.0011 P8 GC+1d culture TAAAATCAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture AAGCTGAGTG (4) 18.7 0.0187 P8 GC+SHH+1d culture GAAGAGGGAA (5) 3.5 0.0035 P8 GC+SHH+1d culture GAAGGACCCT (4) 3.5 0.0035 P8 GC+SHH+1d culture GCCTGTGTAA (3) 3.5 0.0035 P8 GC+SHH+1d culture CCATTCATCA (3) 2.3 0.0023 P8 GC+SHH+1d culture GGGTGGGAAA (4) 2.3 0.0023 P8 GC+SHH+1d culture TGTATCTTTT (9) 2.3 0.0023 P8 GC+SHH+1d culture CAAAAGGCTG 1.2 0.0012 P8 GC+SHH+1d culture CTGAAGCAGT (5) 1.2 0.0012 P8 GC+SHH+1d culture CTTGGAGAAC (3) 1.2 0.0012 P8 GC+SHH+1d culture GCCAGCTTAG (4) 1.2 0.0012 P8 GC+SHH+1d culture GCCTGTATGA (2) 1.2 0.0012 3T3 fibroblasts AAGCTGAGTG (4) 42.1 0.0421 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts CCTCCACCCA (7) 7 0.007 3T3 fibroblasts CTGAAGCAGT (5) 7 0.007 3T3 fibroblasts GATGTGGGTG (13) 3.5 0.0035 3T3 fibroblasts TTGGGGTGGG (4) 3.5 0.0035 E15 cortex AAGCTGAGTG (4) 9.9 0.0099 E15 cortex GGGTGGGAAA (4) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex AAGCTGAGTG (4) 13.6 0.0136 P1 cortex CAAAAGGCTG 4.5 0.0045 P1 cortex CTGAAGCAGT (5) 4.5 0.0045 P1 cortex TTGGGGTGGG (4) 4.5 0.0045 Hypothalamus AAGCTGAGTG (4) 3.6 0.0036 Hypothalamus CTTGGAGAAC (3) 1.8 0.0018 Hypothalamus GCCAGCTTAG (4) 1.8 0.0018 Hypothalamus GCCTGTGTAA (3) 1.8 0.0018 Hypothalamus GGTGGAGCCG (2) 1.8 0.0018 Hypothalamus TAAAATCAAA (2) 1.8 0.0018 Hypothalamus TGTATCTTTT (9) 1.8 0.0018 E12.5 retina AAGCTGAGTG (4) 30 0.03 E12.5 retina GGGTGGGAAA (4) 3.8 0.0038 E12.5 retina TGTATCTTTT (9) 3.8 0.0038 E12.5 retina CAAAAGGCTG 1.9 0.0019 E12.5 retina CTGAAGCAGT (5) 1.9 0.0019 E12.5 retina GAAGATGCTA (2) 1.9 0.0019 E12.5 retina GCATTCATCA (2) 1.9 0.0019 E14.5 retina AAGCTGAGTG (4) 7.3 0.0073 E14.5 retina TGTATCTTTT (9) 3.6 0.0036 E14.5 retina CCATTCATCA (3) 1.8 0.0018 E14.5 retina CTGAAGCAGT (5) 1.8 0.0018 E14.5 retina GCCTGTGTAA (3) 1.8 0.0018 E14.5 retina GGCTCTGGTG (5) 1.8 0.0018 E14.5 retina GGGCCCCCCT (7) 1.8 0.0018 E14.5 retina GGTGGAGCCG (2) 1.8 0.0018 E14.5 retina TTGGGGTGGG (4) 1.8 0.0018 E16.5 retina AAGCTGAGTG (4) 18.1 0.0181 E16.5 retina GCCTGTGTAA (3) 7.2 0.0072 E16.5 retina CCATTCATCA (3) 3.6 0.0036 E16.5 retina CTTGGAGAAC (3) 1.8 0.0018 E16.5 retina GAAAGATGCT (2) 1.8 0.0018 E16.5 retina GGCTCTGGTG (5) 1.8 0.0018 E18.5 retina AAGCTGAGTG (4) 14.6 0.0146 E18.5 retina GCCTGTGTAA (3) 5.5 0.0055 E18.5 retina GGCCTAAGCA (6) 3.6 0.0036 E18.5 retina TAAAATCAAA (2) 3.6 0.0036 E18.5 retina CTGAAGCAGT (5) 1.8 0.0018 E18.5 retina GAAAGATGCT (2) 1.8 0.0018 P0.5 retina AAGCTGAGTG (4) 17.7 0.0177 P0.5 retina GAAGGACCCT (4) 3.9 0.0039 P0.5 retina GGGTGGGAAA (4) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina CCATTCATCA (3) 2 0.002 P0.5 retina CCTCCACCCA (7) 2 0.002 P0.5 retina GAAGATGCTA (2) 2 0.002 P0.5 retina GGCCTAAGCA (6) 2 0.002 P2.5 retina AAGCTGAGTG (4) 12.3 0.0123 P2.5 retina GGGTGGGAAA (4) 5.3 0.0053 P2.5 retina GAAAGATGCT (2) 3.5 0.0035 P2.5 retina GGCCTAAGCA (6) 3.5 0.0035 P2.5 retina CTGAAGCAGT (5) 1.8 0.0018 P2.5 retina GAAGGACCCT (4) 1.8 0.0018 P2.5 retina GCCTGTGTAA (3) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TGTATCTTTT (9) 1.8 0.0018 P2.5 retina TTGGGGTGGG (4) 1.8 0.0018 P4.5 retina AAGCTGAGTG (4) 9.9 0.0099 P4.5 retina GCCTGTGTAA (3) 5.9 0.0059 P4.5 retina GAAGGACCCT (4) 4 0.004 P4.5 retina CTGAAGCAGT (5) 2 0.002 P4.5 retina CTTGGAGAAC (3) 2 0.002 P4.5 retina GAAAGATGCT (2) 2 0.002 P4.5 retina GAAGATGCTA (2) 2 0.002 P4.5 retina GATGTGGGTG (13) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TGTATCTTTT (9) 2 0.002 P6.5 retina AAGCTGAGTG (4) 16.7 0.0167 P6.5 retina GGGTGGGAAA (4) 5 0.005 P6.5 retina GGCCTAAGCA (6) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina CAAAAGGCTG 1.7 0.0017 P6.5 retina CCTCCACCCA (7) 1.7 0.0017 P6.5 retina GAAGATGCTA (2) 1.7 0.0017 P6.5 retina GAAGGACCCT (4) 1.7 0.0017 P6.5 retina GCCTGTGTAA (3) 1.7 0.0017 P6.5 retina TGTATCTTTT (9) 1.7 0.0017 P10.5 crx- retina AAGCTGAGTG (4) 22.3 0.0223 P10.5 crx- retina GGCCTAAGCA (6) 1.9 0.0019 P10.5 crx+ retina AAGCTGAGTG (4) 9.6 0.0096 P10.5 crx+ retina TGTATCTTTT (9) 3.8 0.0038 P10.5 crx+ retina GAAGAGGGAA (5) 1.9 0.0019 P10.5 crx+ retina GCCAGCTTAG (4) 1.9 0.0019 P10.5 crx+ retina GCCTGTGTAA (3) 1.9 0.0019 P10.5 crx+ retina GGGCCCCCCT (7) 1.9 0.0019 P10.5 crx+ retina GGTGGAGCCG (2) 1.9 0.0019 P10.5 crx+ retina TAAAATCAAA (2) 1.9 0.0019 Adult retinal AAGCTGAGTG (4) 9.3 0.0093 Adult retinal CCTCCACCCA (7) 3.7 0.0037 Adult retinal CTTGGAGAAC (3) 1.9 0.0019 Adult retinal GCCTGTGTAA (3) 1.9 0.0019 Adult retinal GGGTGGGAAA (4) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL AAGCTGAGTG (4) 13.4 0.0134 ONL GTCATAGCTG (590) 5.7 0.0057 ONL CCTCCACCCA (7) 3.8 0.0038 ONL CGCCATTTTT (3) 1.9 0.0019 ONL GAAGAGGGAA (5) 1.9 0.0019 ONL GGCTCTGGTG (5) 1.9 0.0019 ONL GGGCCCCCCT (7) 1.9 0.0019 ONL TAAAATCAAA (2) 1.9 0.0019