Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29585	Cacna1g	calcium channel, voltage-dependent, T type, alpha 1G subunit	11		12291
Gene Ontology	calcium channel activity | calcium ion binding | calcium ion transport | cation channel activity | cation transport | integral to membrane | ion channel activity | ion transport | low voltage-gated calcium channel activity | membrane | membrane fraction | plasma membrane | transport | voltage-gated calcium channel activity | voltage-gated calcium channel complex | voltage-gated ion channel activity
Human Homolog	CACNA1G[calcium channel, voltage-dependent, alpha 1G subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATGTGTGGG (2) 6.5 0.0065 P8 Cb GC TATGATGGAC (6) 4.9 0.0049 P8 Cb GC TAGCAGACAG (5) 1.6 0.0016 Cb medulloblastoma TAACTTATTT (4) 6.9 0.0069 Cb medulloblastoma CAGTCCTGGC (5) 2.3 0.0023 Cb medulloblastoma GATGTGTGGG (2) 2.3 0.0023 Cb medulloblastoma TAGCAGACAG (5) 2.3 0.0023 P8 GC+1d culture TATGATGGAC (6) 8 0.008 P8 GC+1d culture TAGCAGACAG (5) 6.8 0.0068 P8 GC+1d culture GATGTGTGGG (2) 3.4 0.0034 P8 GC+SHH+1d culture TAGCAGACAG (5) 9.4 0.0094 P8 GC+SHH+1d culture GATGTGTGGG (2) 5.9 0.0059 E15 cortex TATGATGGAC (6) 19.8 0.0198 P1 cortex TATGATGGAC (6) 95.5 0.0955 P1 cortex TAGCAGACAG (5) 4.5 0.0045 Hypothalamus TAGCAGACAG (5) 9.1 0.0091 Hypothalamus TAACTTATTT (4) 1.8 0.0018 E12.5 retina TAGCAGACAG (5) 5.6 0.0056 E12.5 retina GATGTGTGGG (2) 1.9 0.0019 E14.5 retina TAGCAGACAG (5) 3.6 0.0036 E16.5 retina TAGCAGACAG (5) 10.9 0.0109 E16.5 retina GATGTGTGGG (2) 5.4 0.0054 E16.5 retina TATGATGGAC (6) 3.6 0.0036 E18.5 retina TAGCAGACAG (5) 12.7 0.0127 E18.5 retina TATGATGGAC (6) 1.8 0.0018 P0.5 retina GATGTGTGGG (2) 2 0.002 P0.5 retina TAGCAGACAG (5) 2 0.002 P0.5 retina TATGATGGAC (6) 2 0.002 P2.5 retina TAGCAGACAG (5) 5.3 0.0053 P2.5 retina TATGATGGAC (6) 3.5 0.0035 P4.5 retina TAGCAGACAG (5) 5.9 0.0059 P4.5 retina TATGATGGAC (6) 4 0.004 P4.5 retina GATGTGTGGG (2) 2 0.002 P6.5 retina TAGCAGACAG (5) 8.3 0.0083 P6.5 retina TATGATGGAC (6) 5 0.005 P6.5 retina GATGTGTGGG (2) 3.3 0.0033 P6.5 retina TAACTTATTT (4) 1.7 0.0017 P10.5 crx- retina GATGTGTGGG (2) 5.6 0.0056 P10.5 crx- retina TAACTTATTT (4) 3.7 0.0037 P10.5 crx- retina TAGCAGACAG (5) 1.9 0.0019 P10.5 crx+ retina TAGCAGACAG (5) 11.5 0.0115 P10.5 crx+ retina TAACTTATTT (4) 1.9 0.0019 P10.5 crx+ retina TATGATGGAC (6) 1.9 0.0019 Adult retinal TATGATGGAC (6) 3.7 0.0037 Adult retinal TAGCAGACAG (5) 1.9 0.0019 ONL GATGTGTGGG (2) 1.9 0.0019 ONL TAGCAGACAG (5) 1.9 0.0019