Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29627
5730436H21Rik
RIKEN cDNA 5730436H21 gene
19
107071
Human Homolog
FLJ10439[hypothetical protein FLJ10439]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 43 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTATGTGTG (
9
)
1.6
0.0016
P8 GC+1d culture
TGGTTGGACA (
3
)
6.8
0.0068
P8 GC+1d culture
TGTATGTGTG (
9
)
1.1
0.0011
P8 GC+1d culture
TTGTTAATAA
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TTGTTAATAA
(
4
)
7
0.007
P8 GC+SHH+1d culture
TGGTTGGACA (
3
)
3.5
0.0035
P8 GC+SHH+1d culture
GGCAGCTGGC
(
3
)
1.2
0.0012
3T3 fibroblasts
TGGTTGGACA (
3
)
3.5
0.0035
E15 cortex
TGGTTGGACA (
3
)
4.9
0.0049
P1 cortex
TGGTTGGACA (
3
)
4.5
0.0045
P1 cortex
TGTATGTGTG (
9
)
4.5
0.0045
Hypothalamus
TTGTTAATAA
(
4
)
7.2
0.0072
Hypothalamus
GGCAGCTGGC
(
3
)
1.8
0.0018
E12.5 retina
GGCAGGTGGG (
6
)
1.9
0.0019
E12.5 retina
TGGTTGGACA (
3
)
1.9
0.0019
E12.5 retina
TTGTTAATAA
(
4
)
1.9
0.0019
E14.5 retina
TTGTTAATAA
(
4
)
9.1
0.0091
E14.5 retina
TGGTTGGACA (
3
)
3.6
0.0036
E14.5 retina
TGTATGTGTG (
9
)
1.8
0.0018
E16.5 retina
TTGTTAATAA
(
4
)
5.4
0.0054
E16.5 retina
GGCAGGTGGG (
6
)
3.6
0.0036
E16.5 retina
TGGTTGGACA (
3
)
1.8
0.0018
E16.5 retina
TGTATGTGTG (
9
)
1.8
0.0018
E18.5 retina
GGCAGGTGGG (
6
)
1.8
0.0018
E18.5 retina
TGGTTGGACA (
3
)
1.8
0.0018
E18.5 retina
TGTATGTGTG (
9
)
1.8
0.0018
P0.5 retina
TGGTTGGACA (
3
)
3.9
0.0039
P2.5 retina
GGCAGGTGGG (
6
)
3.5
0.0035
P2.5 retina
TTGTTAATAA
(
4
)
3.5
0.0035
P2.5 retina
TGGTTGGACA (
3
)
1.8
0.0018
P4.5 retina
TTGTTAATAA
(
4
)
9.9
0.0099
P4.5 retina
TGGTTGGACA (
3
)
2
0.002
P6.5 retina
TTGTTAATAA
(
4
)
3.3
0.0033
P10.5 crx- retina
TTGTTAATAA
(
4
)
1.9
0.0019
P10.5 crx+ retina
GGCAGCTGGC
(
3
)
3.8
0.0038
P10.5 crx+ retina
TGGTTGGACA (
3
)
3.8
0.0038
P10.5 crx+ retina
GGCAGGTGGG (
6
)
1.9
0.0019
P10.5 crx+ retina
TTGTTAATAA
(
4
)
1.9
0.0019
Adult retinal
TGGTTGGACA (
3
)
1.9
0.0019
Adult retinal
TGTATGTGTG (
9
)
1.9
0.0019
ONL
TGGTTGGACA (
3
)
3.8
0.0038
ONL
TGTATGTGTG (
9
)
1.9
0.0019
ONL
TTGTTAATAA
(
4
)
1.9
0.0019
