Mouse Retina SAGE Library
[
Home
] [
Libraries
] [
Images
]
Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.296303
Csnk
casein kappa
5
5 45.2 cM
12994
Gene Ontology
extracellular
|
extracellular space
Human Homolog
CSN3[casein kappa]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 101 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
CAAAAAAAAA (
157
)
47.3
0.0473
P8 Cb GC
GCACAAAAAA
(
3
)
3.3
0.0033
P8 Cb GC
GTGGGAACTG
(
3
)
3.3
0.0033
P8 Cb GC
AATGCCACAG (
6
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
CAAAAAAAAA (
157
)
92.5
0.0925
Cb medulloblastoma
CATTTCACAG
(
9
)
4.6
0.0046
Cb medulloblastoma
GTGGGAACTG
(
3
)
4.6
0.0046
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
CAAAAAAAAA (
157
)
37.7
0.0377
P8 GC+1d culture
AAGGTCTGGG
(
4
)
4.6
0.0046
P8 GC+1d culture
AATGCCACAG (
6
)
2.3
0.0023
P8 GC+1d culture
GTGGGAACTG
(
3
)
2.3
0.0023
P8 GC+1d culture
CCAATAAAAA
(
3
)
1.1
0.0011
P8 GC+1d culture
CCACAAAACA (
3
)
1.1
0.0011
P8 GC+1d culture
CCCAATCCTG
(
4
)
1.1
0.0011
P8 GC+1d culture
GCACAAAAAA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
CAAAAAAAAA (
157
)
58.5
0.0585
P8 GC+SHH+1d culture
GAAAAGACAA (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGGGAACTG
(
3
)
2.3
0.0023
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
AATGCCACAG (
6
)
3.5
0.0035
3T3 fibroblasts
GAAAAGACAA (
5
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
CAAAAAAAAA (
157
)
34.6
0.0346
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
CAAAAAAAAA (
157
)
22.7
0.0227
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
CAAAAAAAAA (
157
)
39.8
0.0398
Hypothalamus
AATGCCCACA (
8
)
3.6
0.0036
Hypothalamus
GTGGGAACTG
(
3
)
3.6
0.0036
Hypothalamus
AATGCCACAG (
6
)
1.8
0.0018
Hypothalamus
CATTTCACAG
(
9
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
CAAAAAAAAA (
157
)
22.5
0.0225
E12.5 retina
GAAAAGACAA (
5
)
1.9
0.0019
E12.5 retina
GTGGGAACTG
(
3
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E14.5 retina
AATGCCCACA (
8
)
1.8
0.0018
E14.5 retina
GCACAAAAAA
(
3
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E16.5 retina
GTGGGAACTG
(
3
)
7.2
0.0072
E16.5 retina
AAGGTCTGGG
(
4
)
3.6
0.0036
E16.5 retina
AATGCCACAG (
6
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
CAAAAAAAAA (
157
)
41.8
0.0418
E18.5 retina
GTGGGAACTG
(
3
)
7.3
0.0073
E18.5 retina
CCAATAAAAA
(
3
)
3.6
0.0036
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
CAAAAAAAAA (
157
)
137.4
0.1374
P0.5 retina
GAAAAGACAA (
5
)
3.9
0.0039
P0.5 retina
AAGGTCTGGG
(
4
)
2
0.002
P0.5 retina
AATGCCACAG (
6
)
2
0.002
P0.5 retina
ACAATGCAGA (
3
)
2
0.002
P0.5 retina
CCACAAAACA (
3
)
2
0.002
P0.5 retina
GCACAAAAAA
(
3
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
CAAAAAAAAA (
157
)
52.8
0.0528
P2.5 retina
GTGGGAACTG
(
3
)
3.5
0.0035
P2.5 retina
AAGGTCTGGG
(
4
)
1.8
0.0018
P2.5 retina
ACAATGCAGA (
3
)
1.8
0.0018
P2.5 retina
CCCAATCCTG
(
4
)
1.8
0.0018
P2.5 retina
GAAAAGACAA (
5
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
CAAAAAAAAA (
157
)
41.6
0.0416
P4.5 retina
ACAATGCAGA (
3
)
5.9
0.0059
P4.5 retina
GAAAAGACAA (
5
)
5.9
0.0059
P4.5 retina
AATGCCCACA (
8
)
2
0.002
P4.5 retina
CCACAAAACA (
3
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
CAAAAAAAAA (
157
)
31.7
0.0317
P6.5 retina
GCACAAAAAA
(
3
)
5
0.005
P6.5 retina
CCAATAAAAA
(
3
)
1.7
0.0017
P6.5 retina
CCCAATCCTG
(
4
)
1.7
0.0017
P6.5 retina
GTGGGAACTG
(
3
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
ACAATGCAGA (
3
)
20.4
0.0204
P10.5 crx- retina
CAAAAAAAAA (
157
)
13
0.013
P10.5 crx- retina
AATGCCACAG (
6
)
5.6
0.0056
P10.5 crx- retina
CATTTCACAG
(
9
)
3.7
0.0037
P10.5 crx- retina
GCACAAAAAA
(
3
)
1.9
0.0019
P10.5 crx- retina
GTGGGAACTG
(
3
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
CAAAAAAAAA (
157
)
32.7
0.0327
P10.5 crx+ retina
AATGCCACAG (
6
)
7.7
0.0077
P10.5 crx+ retina
CCCAATCCTG
(
4
)
5.8
0.0058
P10.5 crx+ retina
GTGGGAACTG
(
3
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
CAAAAAAAAA (
157
)
20.4
0.0204
Adult retinal
AATGCCACAG (
6
)
3.7
0.0037
Adult retinal
CCCAATCCTG
(
4
)
3.7
0.0037
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
AATGCCACAG (
6
)
28.7
0.0287
ONL
ATCCACAGGG (
4
)
19.2
0.0192
ONL
CAAAAAAAAA (
157
)
17.2
0.0172
ONL
GCACAAAAAA
(
3
)
1.9
0.0019
ONL
GTGGGAACTG
(
3
)
1.9
0.0019
