Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.296366	Rai1	retinoic acid induced 1	11		19377
Gene Ontology	DNA binding | regulation of transcription, DNA-dependent
Human Homolog	RAI1[retinoic acid induced 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAATAAAA (2) 8.2 0.0082 P8 Cb GC CTCGCTTCTG (2) 1.6 0.0016 P8 Cb GC TGCCAATGAC 1.6 0.0016 Cb medulloblastoma TAAAATAAAA (2) 18.5 0.0185 P8 GC+1d culture TAAAATAAAA (2) 12.6 0.0126 P8 GC+SHH+1d culture TAAAATAAAA (2) 8.2 0.0082 P8 GC+SHH+1d culture TGCCAATGAC 2.3 0.0023 P8 GC+SHH+1d culture CTCGCTTCTG (2) 1.2 0.0012 3T3 fibroblasts CTCGCTTCTG (2) 3.5 0.0035 P1 cortex TAAAATAAAA (2) 13.6 0.0136 Hypothalamus TAAAATAAAA (2) 12.7 0.0127 E12.5 retina TAAAATAAAA (2) 11.3 0.0113 E12.5 retina CTCGCTTCTG (2) 1.9 0.0019 E14.5 retina TAAAATAAAA (2) 3.6 0.0036 E14.5 retina CTCGCTTCTG (2) 1.8 0.0018 E14.5 retina GGATTCAGGG 1.8 0.0018 E14.5 retina TGCCAATGAC 1.8 0.0018 E16.5 retina TAAAATAAAA (2) 5.4 0.0054 E18.5 retina TAAAATAAAA (2) 14.6 0.0146 P0.5 retina CTCGCTTCTG (2) 3.9 0.0039 P0.5 retina TAAAATAAAA (2) 2 0.002 P2.5 retina TAAAATAAAA (2) 8.8 0.0088 P2.5 retina CTCGCTTCTG (2) 1.8 0.0018 P4.5 retina TAAAATAAAA (2) 27.7 0.0277 P4.5 retina GGATTCAGGG 2 0.002 P6.5 retina TAAAATAAAA (2) 11.7 0.0117 P6.5 retina CTCGCTTCTG (2) 1.7 0.0017 P10.5 crx- retina TAAAATAAAA (2) 5.6 0.0056 P10.5 crx+ retina GGATTCAGGG 1.9 0.0019 P10.5 crx+ retina TAAAATAAAA (2) 1.9 0.0019 ONL TAAAATAAAA (2) 7.7 0.0077