Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29644	2610007K22Rik	RIKEN cDNA 2610007K22 gene	15		67040
Gene Ontology	ATP binding | helicase activity | hydrolase activity
Human Homolog	DDX17[DEAD (Asp-Glu-Ala-Asp) box polypeptide 17]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 202 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCTGCTCTG (7) 22.8 0.0228 P8 Cb GC GGCTGTACTG (2) 9.8 0.0098 P8 Cb GC ACATTGAAAA (5) 8.2 0.0082 P8 Cb GC CATTAAGCTG (2) 8.2 0.0082 P8 Cb GC CCCAGGGCTG (4) 3.3 0.0033 P8 Cb GC CTCCCCGCGC 3.3 0.0033 P8 Cb GC GAGACAAGAG (2) 3.3 0.0033 P8 Cb GC GAGGGCTGAA (4) 3.3 0.0033 P8 Cb GC GGGAAATTTC (9) 3.3 0.0033 P8 Cb GC GAGTTAACCC (3) 1.6 0.0016 P8 Cb GC GCAGGAGTGA (7) 1.6 0.0016 P8 Cb GC GCCACTGTGT (4) 1.6 0.0016 P8 Cb GC GGGCCTGGCC (5) 1.6 0.0016 P8 Cb GC GTATAATGCT 1.6 0.0016 P8 Cb GC GTGGGTTCAA (4) 1.6 0.0016 Cb medulloblastoma ACATTGAAAA (5) 27.7 0.0277 Cb medulloblastoma CCCAGGGCTG (4) 4.6 0.0046 Cb medulloblastoma GGCTGTACTG (2) 4.6 0.0046 Cb medulloblastoma GGCTGTCCTG (5) 4.6 0.0046 Cb medulloblastoma CTCCCCGCGC 2.3 0.0023 Cb medulloblastoma CTGGCATTCT (5) 2.3 0.0023 Cb medulloblastoma CTTGGCATTC 2.3 0.0023 Cb medulloblastoma GCAGGAGTGA (7) 2.3 0.0023 Cb medulloblastoma GGAAGGTGGG (11) 2.3 0.0023 Cb medulloblastoma GGCTGCTCTG (7) 2.3 0.0023 Cb medulloblastoma GTGGGTTCAA (4) 2.3 0.0023 P8 GC+1d culture GGCTGTCCTG (5) 13.7 0.0137 P8 GC+1d culture GGCTGCTCTG (7) 11.4 0.0114 P8 GC+1d culture GGCTGTACTG (2) 11.4 0.0114 P8 GC+1d culture CTCCCTGGAC (3) 4.6 0.0046 P8 GC+1d culture CATTAAGCTG (2) 3.4 0.0034 P8 GC+1d culture ACATTGAAAA (5) 2.3 0.0023 P8 GC+1d culture GGGAAATTTC (9) 2.3 0.0023 P8 GC+1d culture GTGGGTTCAA (4) 2.3 0.0023 P8 GC+1d culture CATCAAGGGT 1.1 0.0011 P8 GC+1d culture CCCCCTCCCC (5) 1.1 0.0011 P8 GC+1d culture CTATGGCATT (5) 1.1 0.0011 P8 GC+1d culture GTATAATGCT 1.1 0.0011 P8 GC+SHH+1d culture GGCTGCTCTG (7) 18.7 0.0187 P8 GC+SHH+1d culture GGCTGTCCTG (5) 10.5 0.0105 P8 GC+SHH+1d culture ACATTGAAAA (5) 4.7 0.0047 P8 GC+SHH+1d culture CCCAGGGCTG (4) 3.5 0.0035 P8 GC+SHH+1d culture GCAGGAGTGA (7) 3.5 0.0035 P8 GC+SHH+1d culture GGCTGTACTG (2) 3.5 0.0035 P8 GC+SHH+1d culture GGGAAATTTC (9) 2.3 0.0023 P8 GC+SHH+1d culture CATTAAGCTG (2) 1.2 0.0012 P8 GC+SHH+1d culture CTCCCTGGAC (3) 1.2 0.0012 P8 GC+SHH+1d culture CTTGGCATTC 1.2 0.0012 P8 GC+SHH+1d culture GCCACTGTGT (4) 1.2 0.0012 P8 GC+SHH+1d culture GGGCCTGGCC (5) 1.2 0.0012 P8 GC+SHH+1d culture GTATAATGCT 1.2 0.0012 P8 GC+SHH+1d culture GTGGGTTCAA (4) 1.2 0.0012 3T3 fibroblasts GGCTGCTCTG (7) 35 0.035 3T3 fibroblasts GGCTGTCCTG (5) 31.5 0.0315 3T3 fibroblasts CCCAGGGCTG (4) 3.5 0.0035 3T3 fibroblasts CTCCCCGCGC 3.5 0.0035 3T3 fibroblasts GCAGGAGTGA (7) 3.5 0.0035 3T3 fibroblasts GCCACTGTGT (4) 3.5 0.0035 3T3 fibroblasts GTGGGTTTAA 3.5 0.0035 E15 cortex GGCTGCTCTG (7) 49.5 0.0495 E15 cortex GGCTGTCCTG (5) 34.6 0.0346 E15 cortex CCCAGGGCTG (4) 9.9 0.0099 E15 cortex GGAAGGTGGG (11) 9.9 0.0099 E15 cortex ACATTGAAAA (5) 4.9 0.0049 P1 cortex GGCTGTCCTG (5) 18.2 0.0182 P1 cortex GGCTGTACTG (2) 13.6 0.0136 P1 cortex CCCCTAACAA (3) 4.5 0.0045 P1 cortex CTCCCTGGAC (3) 4.5 0.0045 Hypothalamus GGAAGGTGGG (11) 7.2 0.0072 Hypothalamus GGCTGCTCTG (7) 7.2 0.0072 Hypothalamus GGCTGTCCTG (5) 3.6 0.0036 Hypothalamus ACATTGAAAA (5) 1.8 0.0018 Hypothalamus CATTAAGCTG (2) 1.8 0.0018 Hypothalamus CTATGGCATT (5) 1.8 0.0018 Hypothalamus GGAAATAAAG 1.8 0.0018 Hypothalamus GGCTGTACTG (2) 1.8 0.0018 Hypothalamus GTATAATGCT 1.8 0.0018 Hypothalamus GTGGGTTCAA (4) 1.8 0.0018 Hypothalamus TACTGAGTGA 1.8 0.0018 E12.5 retina GGCTGCTCTG (7) 30 0.03 E12.5 retina ACATTGAAAA (5) 16.9 0.0169 E12.5 retina GGCTGTACTG (2) 16.9 0.0169 E12.5 retina CATTAAGCTG (2) 5.6 0.0056 E12.5 retina GGCTGTCCTG (5) 5.6 0.0056 E12.5 retina GCAGGAGTGA (7) 3.8 0.0038 E12.5 retina GTATAATGCT 3.8 0.0038 E12.5 retina CCCAGGGCTG (4) 1.9 0.0019 E12.5 retina CCCCCTCCCC (5) 1.9 0.0019 E12.5 retina CTTGTGGCAT (2) 1.9 0.0019 E12.5 retina GGAAGGTGGG (11) 1.9 0.0019 E12.5 retina GTGGGTTCAA (4) 1.9 0.0019 E12.5 retina TGTGTGGCTG (6) 1.9 0.0019 E14.5 retina GGCTGCTCTG (7) 51 0.051 E14.5 retina ACATTGAAAA (5) 36.4 0.0364 E14.5 retina GGCTGTACTG (2) 3.6 0.0036 E14.5 retina GGCTGTCCTG (5) 3.6 0.0036 E14.5 retina CCCAGGGCTG (4) 1.8 0.0018 E14.5 retina GTGGGTTTAA 1.8 0.0018 E16.5 retina GGCTGCTCTG (7) 41.7 0.0417 E16.5 retina ACATTGAAAA (5) 27.2 0.0272 E16.5 retina GGAAGGTGGG (11) 3.6 0.0036 E16.5 retina CCCAGGGCTG (4) 1.8 0.0018 E16.5 retina GCAGGAGTGA (7) 1.8 0.0018 E16.5 retina GGCTGTACTG (2) 1.8 0.0018 E16.5 retina GGCTGTCCTG (5) 1.8 0.0018 E18.5 retina GGCTGCTCTG (7) 23.6 0.0236 E18.5 retina ACATTGAAAA (5) 16.4 0.0164 E18.5 retina GGCTGTCCTG (5) 5.5 0.0055 E18.5 retina CCCAGGGCTG (4) 1.8 0.0018 E18.5 retina CCCCTAACAA (3) 1.8 0.0018 E18.5 retina GGCTGTACTG (2) 1.8 0.0018 E18.5 retina TACTGAGTGA 1.8 0.0018 P0.5 retina GGCTGTCCTG (5) 31.4 0.0314 P0.5 retina GGCTGCTCTG (7) 21.6 0.0216 P0.5 retina CATCAAGGGT 7.9 0.0079 P0.5 retina CCCAGGGCTG (4) 5.9 0.0059 P0.5 retina GTGGGTTCAA (4) 5.9 0.0059 P0.5 retina ACATTGAAAA (5) 3.9 0.0039 P0.5 retina CTGGCATTCT (5) 3.9 0.0039 P0.5 retina GGAAGGTGGG (11) 3.9 0.0039 P0.5 retina CCCCCTCCCC (5) 2 0.002 P0.5 retina CTATGGCATT (5) 2 0.002 P0.5 retina TACTGAGTGA 2 0.002 P0.5 retina TGTGTGGCTG (6) 2 0.002 P2.5 retina GGCTGCTCTG (7) 21.1 0.0211 P2.5 retina GGCTGTCCTG (5) 14.1 0.0141 P2.5 retina GGAAGGTGGG (11) 7 0.007 P2.5 retina CCCCCTCCCC (5) 5.3 0.0053 P2.5 retina GCAGGAGTGA (7) 5.3 0.0053 P2.5 retina GGCTGTACTG (2) 5.3 0.0053 P2.5 retina ACATTGAAAA (5) 3.5 0.0035 P2.5 retina CCCAGGGCTG (4) 3.5 0.0035 P2.5 retina CATTAAGCTG (2) 1.8 0.0018 P2.5 retina CCCCTAACAA (3) 1.8 0.0018 P2.5 retina GAGTTAACCC (3) 1.8 0.0018 P2.5 retina GGGCCTGGCC (5) 1.8 0.0018 P2.5 retina GGGCTGTCCT (3) 1.8 0.0018 P2.5 retina GTATAATGCT 1.8 0.0018 P2.5 retina GTGGGTTCAA (4) 1.8 0.0018 P2.5 retina TACTGAGTGA 1.8 0.0018 P2.5 retina TGTGTGGCTG (6) 1.8 0.0018 P4.5 retina GGCTGCTCTG (7) 23.8 0.0238 P4.5 retina GGAAGGTGGG (11) 15.9 0.0159 P4.5 retina GGCTGTCCTG (5) 11.9 0.0119 P4.5 retina ACATTGAAAA (5) 5.9 0.0059 P4.5 retina GAGACAAGAG (2) 4 0.004 P4.5 retina CCCCCTCCCC (5) 2 0.002 P4.5 retina CTCCCTGGAC (3) 2 0.002 P4.5 retina CTTGTGGCAT (2) 2 0.002 P4.5 retina GCAGGAGTGA (7) 2 0.002 P4.5 retina GGCTGTACTG (2) 2 0.002 P4.5 retina GTGGGTTCAA (4) 2 0.002 P6.5 retina GGCTGCTCTG (7) 30 0.03 P6.5 retina GGCTGTCCTG (5) 16.7 0.0167 P6.5 retina ACATTGAAAA (5) 10 0.01 P6.5 retina TACTGAGTGA 6.7 0.0067 P6.5 retina GGAAATAAAG 5 0.005 P6.5 retina GGAAGGTGGG (11) 5 0.005 P6.5 retina GGCTGTACTG (2) 3.3 0.0033 P6.5 retina GTATAATGCT 3.3 0.0033 P6.5 retina GTGGGTTCAA (4) 3.3 0.0033 P6.5 retina CTCCCTGGAC (3) 1.7 0.0017 P10.5 crx- retina GGCTGTACTG (2) 13 0.013 P10.5 crx- retina GGCTGCTCTG (7) 11.1 0.0111 P10.5 crx- retina ACATTGAAAA (5) 9.3 0.0093 P10.5 crx- retina GCAGGAGTGA (7) 3.7 0.0037 P10.5 crx- retina GGAAGGTGGG (11) 3.7 0.0037 P10.5 crx- retina GGCTGTCCTG (5) 3.7 0.0037 P10.5 crx+ retina GGCTGCTCTG (7) 25 0.025 P10.5 crx+ retina GGCTGTCCTG (5) 9.6 0.0096 P10.5 crx+ retina ACATTGAAAA (5) 7.7 0.0077 P10.5 crx+ retina CTCCCTGGAC (3) 3.8 0.0038 P10.5 crx+ retina CCCAGGGCTG (4) 1.9 0.0019 P10.5 crx+ retina GAGGGCTGAA (4) 1.9 0.0019 P10.5 crx+ retina GAGTTAACCC (3) 1.9 0.0019 P10.5 crx+ retina GCAGGAGTGA (7) 1.9 0.0019 P10.5 crx+ retina GCCACTGTGT (4) 1.9 0.0019 P10.5 crx+ retina GGAAGGTGGG (11) 1.9 0.0019 P10.5 crx+ retina GTGGGTTCAA (4) 1.9 0.0019 P10.5 crx+ retina GTGGGTTTAA 1.9 0.0019 Adult retinal GGCTGTCCTG (5) 46.3 0.0463 Adult retinal GGCTGCTCTG (7) 11.1 0.0111 Adult retinal CCCAGGGCTG (4) 7.4 0.0074 Adult retinal CTCCCTGGAC (3) 5.6 0.0056 Adult retinal CATCAAGGGT 3.7 0.0037 Adult retinal GGCTGTACTG (2) 3.7 0.0037 Adult retinal GGGCTGTCCT (3) 3.7 0.0037 Adult retinal CCCCCTCCCC (5) 1.9 0.0019 Adult retinal CTTGGCATTC 1.9 0.0019 Adult retinal CTTGTGGCAT (2) 1.9 0.0019 Adult retinal GGGAAATTTC (9) 1.9 0.0019 Adult retinal GTATAATGCT 1.9 0.0019 ONL CCCAGGGCTG (4) 9.6 0.0096 ONL GGCTGCTCTG (7) 7.7 0.0077 ONL GGCTGTCCTG (5) 7.7 0.0077 ONL GCAGGAGTGA (7) 5.7 0.0057 ONL CTCCCTGGAC (3) 3.8 0.0038 ONL TACTGAGTGA 3.8 0.0038 ONL CATTAAGCTG (2) 1.9 0.0019 ONL CCCCTAACAA (3) 1.9 0.0019 ONL GGAAGGTGGG (11) 1.9 0.0019 ONL TGTGTGGCTG (6) 1.9 0.0019