Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.296902
Tapbpl
TAP binding protein-like
6
213233
Human Homolog
TAPBPL[TAP binding protein-like]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
AAGACCCACC (
3
)
6.5
0.0065
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
AAGACCCACC (
3
)
4.6
0.0046
Cb medulloblastoma
GCACCAGGCC
(
4
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
AAGACCCACC (
3
)
10.3
0.0103
P8 GC+1d culture
GCACCAGGCC
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
AAGACCCACC (
3
)
8.2
0.0082
P8 GC+SHH+1d culture
GCACCAGGCC
(
4
)
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
AAGACCCACC (
3
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
AAGACCCACC (
3
)
9.1
0.0091
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
AAGACCCACC (
3
)
5.4
0.0054
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
AAGACCCACC (
3
)
9.4
0.0094
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
AAGACCCACC (
3
)
10.9
0.0109
E14.5 retina
GCACCAGGCC
(
4
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
AAGACCCACC (
3
)
3.6
0.0036
E16.5 retina
GGTGGGGTCA (
2
)
1.8
0.0018
E16.5 retina
GTGGTCACAA (
7
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
AAGACCCACC (
3
)
3.9
0.0039
P0.5 retina
GCACCAGGCC
(
4
)
2
0.002
P0.5 retina
GTGGTCACAA (
7
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
AAGACCCACC (
3
)
5.9
0.0059
P4.5 retina
GCACCAGGCC
(
4
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
AAGACCCACC (
3
)
5
0.005
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
AAGACCCACC (
3
)
5.6
0.0056
P10.5 crx- retina
GGTGGGGTCA (
2
)
1.9
0.0019
P10.5 crx- retina
GTGCTGAAGA (
9
)
1.9
0.0019
P10.5 crx- retina
GTGGTCACAA (
7
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
AAGACCCACC (
3
)
9.6
0.0096
P10.5 crx+ retina
GTGCTGAAGA (
9
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
AAGACCCACC (
3
)
5.6
0.0056
Adult retinal
GTGGTCACAA (
7
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
AAGACCCACC (
3
)
5.7
0.0057
ONL
GGTGGGGTCA (
2
)
1.9
0.0019
