Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.296922	Tpt1	tumor protein, translationally-controlled 1	6	14 43.0 cM	22070
Gene Ontology	anti-apoptosis | calcium ion binding | cytoplasm | protein binding
Human Homolog	TPT1[tumor protein, translationally-controlled 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 300 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATCACTCA AAATCAGATG AATGGAGTCA ATTTTCTTTA TAAATCCAAA TAGTCTTTGA TCCTGTGGGT TGGGCTGTCT TGGGGTTGGC (2) TGGGGTTGTC TGGGTAGTCT TGGGTCGTCT TGGGTTGTAT TGGGTTGTCC TGGGTTGTCT TGGGTTGTTT TGGGTTTTCT TGGGTTTTTT (2) TTCTCACCAA TTTTCACCAA TTTTTTTTCC (3) 662.4 0.6624 Cb medulloblastoma AATGGAGTCA ATTTTTTTTA (2) GCTGCTCCCC (2) TAAATCCAAA TCCTGTGGGT TGGGGTGTCC TGGGTGTCTA TGGGTTGTCT TGGGTTGTTT TGGGTTTTTT (2) TTTTTTTTCC (3) 289 0.289 P8 GC+1d culture AAATCACTCA AAATCAGATG ATGTCTTTAA (3) ATTTTCTTTA GCTGCTCCCC (2) GTTTTTTTAA (2) TAAATCCAAA TCCTGTGGGT TGGGATGTCT TGGGTAGTCT TGGGTCGTCT TGGGTGTCTA TGGGTTGTAT TGGGTTGTCC TGGGTTGTCT TGGGTTGTTT TGGGTTTTCT TGGGTTTTTT (2) TTTTTTTTCC (3) 578.4 0.5784 P8 GC+SHH+1d culture AAAATGTCAA AAATCAGATG AACCATCACT ATTTTCTTTA ATTTTTTTTA (2) TAAATCCAAA TCATTGTGGG TCCTGTGGGT TGGGATGTCT TGGGCTGTCT TGGGGTTGTC TGGGTCGTCT TGGGTGTCTA TGGGTTGTAT TGGGTTGTCT TGGGTTGTTT TGGGTTTTCT TGGGTTTTTT (2) TTTTTTTTCC (3) 578.4 0.5784 3T3 fibroblasts ATTGGCTGCT GCGTCATAAC GCTGCTCCCC (2) TGGGTTGTCT TTTTTTTTCC (3) 164.7 0.1647 E15 cortex TGGCTTGTCT TGGGCTGTCT TGGGGTTGGC (2) TGGGTGTCTA TGGGTTGCTA TGGGTTGTCT 296.6 0.2966 P1 cortex AAAATGTCAA AATCCAGATG ATTTTCTTTA TAAATCCAAA TCCGTGGGTG TGGGTTGCTA TGGGTTGGCT TGGGTTGTCT 336.1 0.3361 Hypothalamus AAATCACTCA ATTTTCTTTA TAAATCCAAA TAGTCTTTGA TCCTGTGGGT TGGGCTGTCT TGGGTGTCTA TGGGTTGTAT TGGGTTGTCT TGGGTTGTTT TGGGTTTTCT TTTTTTTTCC (3) 440 0.44 E12.5 retina AAATCACTCA AAATCAGATG ACGAGCTGTT ATGTCTTTAA (3) ATTTTCTTTA ATTTTTTTTA (2) TAAATCCAAA TCCTGTGGGT TGGGGTTGTC TGGGTCGTCT TGGGTTGCTA TGGGTTGTCC TGGGTTGTCT TGGGTTGTTT TGGGTTTTCT TTTTCACCAA TTTTTTTTCC (3) 1019.7 1.0197 E14.5 retina AAATCACTCA AACCATCACT AATCCAGATG AATGGAGTCA ATGTCTTTAA (3) ATTGGCTGCT ATTTTCTTTA TAGTCTTTGA TCATTGTGGG TCCTGTGGGT TGGGCTGTCT TGGGGTTGTC TGGGTCGTCT TGGGTTGCTA TGGGTTGGCT TGGGTTGTAT TGGGTTGTCT TGGGTTGTTT TGGGTTTTCT TTTTCACCAA TTTTTTTTCC (3) 1297 1.297 E16.5 retina AAATCACTCA AACCATCACT AATCCAGATG AATGGAGTCA ATTTTCTTTA TAAATCCAAA TAGTCTTTGA TCCTGTGGGT TGGGCTGTCT TGGGGTTGTC TGGGTCGTCT TGGGTGTCTA TGGGTTGGCT TGGGTTGTCC TGGGTTGTCT TGGGTTGTTT TGGGTTTTCT TTTTCACCAA TTTTTTTTCC (3) 1369 1.369 E18.5 retina AAAATGTCAA AACCATCACT AATGGAGTCA ACGAGCTGTT ATTTTCTTTA GCGTCATAAC GGCATTTTTT TAAATCCAAA TAGTCTTTGA TCCTGTGGGT TGGCTTGTCT TGGGCTGTCT TGGGGTTGTC TGGGTCGTCT TGGGTGTCTA TGGGTTGGCT TGGGTTGTAT TGGGTTGTCT TGGGTTGTTT TGGGTTTTTT (2) TTTTCACCAA TTTTTTTTCC (3) 1911.6 1.9116 P0.5 retina AAATCACTCA AATCCAGATG AATGGAGTCA ATTGGCTGCT ATTTTCTTTA GTTTTTTTAA (2) TAAATCCAAA TCCTGTGGGT TGGGCTGTCT TGGGGTTGTC TGGGTCGTCT TGGGTGTCTA TGGGTTGCTA TGGGTTGGCT TGGGTTGTCC TGGGTTGTCT TGGGTTGTTT TTTTCACCAA TTTTTTTTCC (3) 789.3 0.7893 P2.5 retina AAAATGTCAA AATCCAGATG TAAATCCAAA TAGTCTTTGA TCCTGTGGGT TGGGCTGTCT TGGGGTGTCC TGGGGTTGGC (2) TGGGGTTGTC TGGGTTGCTA TGGGTTGGCT TGGGTTGTCT TGGGTTGTTT TGGGTTTTCT TGGGTTTTTT (2) TTTTTTTTCC (3) 813.1 0.8131 P4.5 retina AATGGAGTCA ACGAGCTGTT ATTTTCTTTA GTTTTTTTAA (2) TAAATCCAAA TCATTGTGGG TCCTGTGGGT TGGGGTTGTC TGGGTCGTCT TGGGTTGCTA TGGGTTGGCT TGGGTTGTCC TGGGTTGTCT TGGGTTGTTT TGGGTTTTTT (2) TTTTTTTTCC (3) 818.5 0.8185 P6.5 retina AAAATGTCAA AACCATCACT ATTTTCTTTA GTTTTTTTAA (2) TAAATCCAAA TAGTCTTTGA TCCTGTGGGT TGGGGTTGTC TGGGTCGTCT TGGGTTGCTA TGGGTTGGCT TGGGTTGTCC TGGGTTGTCT TGGGTTGTTT TGGGTTTTCT TTTTTTTTCC (3) 402 0.402 P10.5 crx- retina AAAATGTCAA AAATCACTCA AACCATCACT AATCCAGATG ATTTTCTTTA GCTGCTCCCC (2) TAAATCCAAA TGGGGTTGGC (2) TGGGGTTGTC TGGGTCGTCT TGGGTTGCTA TGGGTTGGCT TGGGTTGTCT TGGGTTGTTT TGGGTTTTCT TGGGTTTTTT (2) TTCTCACCAA 264.1 0.2641 P10.5 crx+ retina AAAATGTCAA AAATCAGATG ATTTTCTTTA GCTGCTCCCC (2) TAAATCCAAA TCCTGTGGGT TGGGTCGTCT TGGGTTGTCT TGGGTTGTTT TGGGTTTTTT (2) TTCTCACCAA TTTTTTTTCC (3) 353.6 0.3536 Adult retinal AAAATGTCAA AAATCAGATG ATGTCTTTAA (3) GTTTTTTTAA (2) TAAATCCAAA TCCTGTGGGT TGGGGTGTCC TGGGGTTGGC (2) TGGGTTGGCT TGGGTTGTAT TGGGTTGTCC TGGGTTGTCT TGGGTTGTTT TGGGTTTTCT TGGGTTTTTT (2) TTTTTTTTCC (3) 187.6 0.1876 ONL AAAATGTCAA GTTTTTTTAA (2) TCCTGTGGGT TGGGTTGGCT TGGGTTGTCT TGGGTTGTTT TGGGTTTTCT TTTTTTTTCC (3) 168.4 0.1684