| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCCAAGGAGA (3)
| 3.3 | 0.0033 |
| Cb medulloblastoma | ATTGTAAATT (2) CAGTACTCTT (2) GGCTTGAGTT (2)
| 9.2 | 0.0092 |
| P8 GC+1d culture | ATTGTAAATT (2) CCCAAGGAGA (3)
| 6.8 | 0.0068 |
| P8 GC+SHH+1d culture | CCCAAGGAGA (3) GGCTTGAGTT (2)
| 3.5 | 0.0035 |
| 3T3 fibroblasts | CCCAAGGAGA (3)
| 38.6 | 0.0386 |
| E15 cortex | CCCAAGGAGA (3) GGCTTGAGTT (2)
| 9.8 | 0.0098 |
| P1 cortex | ATTGTAAATT (2) CCCAAGGAGA (3)
| 9 | 0.009 |
| Hypothalamus | ATGCTATGGA (3) CCCAAGGAGA (3)
| 5.4 | 0.0054 |
| E12.5 retina | ATTGTAAATT (2) CAGTACTCTT (2) CCCAAGGAGA (3)
| 7.6 | 0.0076 |
| E14.5 retina | CCCAAGGAGA (3)
| 1.8 | 0.0018 |
| E16.5 retina | ATGCTATGGA (3) ATTGTAAATT (2) CAGTACTCTT (2) CCCAAGGAGA (3)
| 12.6 | 0.0126 |
| E18.5 retina | ATTGTAAATT (2)
| 1.8 | 0.0018 |
| P0.5 retina | ATGCTATGGA (3) CCCAAGGAGA (3)
| 9.9 | 0.0099 |
| P2.5 retina | CCCAAGGAGA (3)
| 1.8 | 0.0018 |
| P4.5 retina | GGCTTGAGTT (2)
| 2 | 0.002 |
| P6.5 retina | ATTGTAAATT (2) CAGTACTCTT (2) CCCAAGGAGA (3)
| 11.7 | 0.0117 |
| P10.5 crx- retina | ATTGTAAATT (2) CCCAAGGAGA (3)
| 7.5 | 0.0075 |
| P10.5 crx+ retina | CCCAAGGAGA (3)
| 1.9 | 0.0019 |
| Adult retinal | ATGCTATGGA (3) CCCAAGGAGA (3)
| 7.5 | 0.0075 |
| ONL | CCCAAGGAGA (3)
| 9.6 | 0.0096 |