| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAGGAGCATC GGCTTTCCAG
| 9.8 | 0.0098 |
| Cb medulloblastoma | CAGGAGCATC CAGGTCAGAC (3) GAGGGACAAG (2) GGCTTTCCAG
| 27.7 | 0.0277 |
| P8 GC+1d culture | CAGGAGCATC GAGGGACAAG (2) GGCTTTCCAG
| 10.3 | 0.0103 |
| P8 GC+SHH+1d culture | CAGGAGCATC CAGGTCAGAC (3) GAGGGACAAG (2)
| 10.6 | 0.0106 |
| 3T3 fibroblasts | CAGGAGCATC GAGGGACAAG (2) GGCTTTCCAG
| 10.5 | 0.0105 |
| E15 cortex | CAGGAGCATC
| 4.9 | 0.0049 |
| P1 cortex | GAGGGACAAG (2)
| 4.5 | 0.0045 |
| Hypothalamus | CAGGAGCATC CAGGTCAGAC (3) GAGGGACAAG (2) GGCTTTCCAG
| 57.9 | 0.0579 |
| E12.5 retina | CAGGAGCATC GAGGGACAAG (2) GGCTTTCCAG
| 11.3 | 0.0113 |
| E14.5 retina | CAGGAGCATC
| 7.3 | 0.0073 |
| E16.5 retina | CAGGAGCATC GAGGGACAAG (2) GGCTTTCCAG
| 10.8 | 0.0108 |
| E18.5 retina | CAGGAGCATC GAGGGACAAG (2) GGCTTTCCAG
| 7.2 | 0.0072 |
| P0.5 retina | CAGGAGCATC GAGGGACAAG (2) GGCTTTCCAG
| 21.6 | 0.0216 |
| P2.5 retina | CAGGAGCATC CAGGTCAGAC (3) GAGGGACAAG (2) GGCTTTCCAG
| 15.9 | 0.0159 |
| P4.5 retina | CAGGAGCATC GAGGGACAAG (2) GGCTTTCCAG
| 11.9 | 0.0119 |
| P6.5 retina | CAGGAGCATC GAGGGACAAG (2)
| 15 | 0.015 |
| P10.5 crx- retina | CAGGAGCATC CAGGTCAGAC (3) GAGGGACAAG (2) GGCTTTCCAG
| 9.4 | 0.0094 |
| P10.5 crx+ retina | CAGGAGCATC GAGGGACAAG (2) GGCTTTCCAG
| 19.3 | 0.0193 |
| Adult retinal | CAGGAGCATC GAGGGACAAG (2) GGCTTTCCAG
| 22.2 | 0.0222 |
| ONL | CAGGAGCATC GAGGGACAAG (2) GGCTTTCCAG
| 23 | 0.023 |