Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29722
Usmg5
upregulated during skeletal muscle growth 5
19
66477
Human Homolog
USMG5[upregulated during skeletal muscle growth 5]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 69 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAATACTCAA
(
3
)
21.2
0.0212
P8 Cb GC
GCTGGTGCAG
(
3
)
3.3
0.0033
P8 Cb GC
TTGGGTTTCA
(
2
)
3.3
0.0033
P8 Cb GC
ACGTCAATCT
(
2
)
1.6
0.0016
P8 Cb GC
GGACTTAACA
(
2
)
1.6
0.0016
Cb medulloblastoma
TAATACTCAA
(
3
)
48.6
0.0486
Cb medulloblastoma
TAATATTCAA (
4
)
4.6
0.0046
Cb medulloblastoma
TTGGGTTTCA
(
2
)
2.3
0.0023
P8 GC+1d culture
TAATACTCAA
(
3
)
52.5
0.0525
P8 GC+1d culture
TAATATTCAA (
4
)
3.4
0.0034
P8 GC+1d culture
TTGGGTTTCA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TAATACTCAA
(
3
)
57.4
0.0574
P8 GC+SHH+1d culture
TAATATTCAA (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
GGACTTAACA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TTGGGTTTCA
(
2
)
2.3
0.0023
3T3 fibroblasts
TAATACTCAA
(
3
)
3.5
0.0035
P1 cortex
TAATACTCAA
(
3
)
18.2
0.0182
Hypothalamus
TAATACTCAA
(
3
)
199.2
0.1992
Hypothalamus
ACGTCAATCT
(
2
)
10.9
0.0109
Hypothalamus
GGACTTAACA
(
2
)
10.9
0.0109
Hypothalamus
ATGAGTTCAC
(
2
)
3.6
0.0036
Hypothalamus
GCTGGTGCAG
(
3
)
1.8
0.0018
Hypothalamus
TAATATTCAA (
4
)
1.8
0.0018
E12.5 retina
TAATACTCAA
(
3
)
43.2
0.0432
E12.5 retina
TTGGGTTTCA
(
2
)
3.8
0.0038
E12.5 retina
GCTGGTGCAG
(
3
)
1.9
0.0019
E12.5 retina
TAATATTCAA (
4
)
1.9
0.0019
E14.5 retina
TAATACTCAA
(
3
)
56.5
0.0565
E14.5 retina
ATGAGTTCAC
(
2
)
3.6
0.0036
E14.5 retina
ACGTCAATCT
(
2
)
1.8
0.0018
E14.5 retina
GCTACATATG
(
3
)
1.8
0.0018
E14.5 retina
TTGGGTTTCA
(
2
)
1.8
0.0018
E16.5 retina
TAATACTCAA
(
3
)
52.5
0.0525
E16.5 retina
GCTGGTGCAG
(
3
)
14.5
0.0145
E16.5 retina
ATGAGTTCAC
(
2
)
3.6
0.0036
E16.5 retina
ACGTCAATCT
(
2
)
1.8
0.0018
E16.5 retina
GGACTTAACA
(
2
)
1.8
0.0018
E18.5 retina
TAATACTCAA
(
3
)
89.1
0.0891
E18.5 retina
GCTGGTGCAG
(
3
)
1.8
0.0018
E18.5 retina
TTGGGTTTCA
(
2
)
1.8
0.0018
P0.5 retina
TAATACTCAA
(
3
)
23.6
0.0236
P0.5 retina
TTGGGTTTCA
(
2
)
3.9
0.0039
P0.5 retina
TAATATTCAA (
4
)
2
0.002
P2.5 retina
TAATACTCAA
(
3
)
38.7
0.0387
P2.5 retina
TTGGGTTTCA
(
2
)
7
0.007
P2.5 retina
TAATATTCAA (
4
)
3.5
0.0035
P2.5 retina
ACGTCAATCT
(
2
)
1.8
0.0018
P2.5 retina
GCTACATATG
(
3
)
1.8
0.0018
P4.5 retina
TAATACTCAA
(
3
)
67.4
0.0674
P4.5 retina
TTGGGTTTCA
(
2
)
4
0.004
P4.5 retina
GGACTTAACA
(
2
)
2
0.002
P4.5 retina
TAATATTCAA (
4
)
2
0.002
P6.5 retina
TAATACTCAA
(
3
)
50
0.05
P6.5 retina
GCTGGTGCAG
(
3
)
3.3
0.0033
P6.5 retina
TTGGGTTTCA
(
2
)
3.3
0.0033
P6.5 retina
GGACTTAACA
(
2
)
1.7
0.0017
P6.5 retina
TAATATTCAA (
4
)
1.7
0.0017
P10.5 crx- retina
TAATACTCAA
(
3
)
22.3
0.0223
P10.5 crx- retina
TAATATTCAA (
4
)
3.7
0.0037
P10.5 crx- retina
TTGGGTTTCA
(
2
)
3.7
0.0037
P10.5 crx- retina
GCTGGTGCAG
(
3
)
1.9
0.0019
P10.5 crx- retina
GGACTTAACA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TAATACTCAA
(
3
)
36.5
0.0365
P10.5 crx+ retina
TTGGGTTTCA
(
2
)
5.8
0.0058
P10.5 crx+ retina
GGACTTAACA
(
2
)
1.9
0.0019
Adult retinal
TAATACTCAA
(
3
)
22.2
0.0222
Adult retinal
GCTACATATG
(
3
)
1.9
0.0019
ONL
TAATACTCAA
(
3
)
19.2
0.0192
ONL
TTGGGTTTCA
(
2
)
1.9
0.0019
