Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.297552
5930418K15Rik
RIKEN cDNA 5930418K15 gene
5
77106
Mm.297552
C76977
expressed sequence C76977
17
98054
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 55 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGGTTCACA (
32
)
14.7
0.0147
P8 Cb GC
AGGAGAAGTT (
4
)
6.5
0.0065
Cb medulloblastoma
GTGGTTCACA (
32
)
11.6
0.0116
Cb medulloblastoma
AGGAGAAGTT (
4
)
4.6
0.0046
Cb medulloblastoma
CCTGTAACCC (
5
)
2.3
0.0023
P8 GC+1d culture
GTGGTTCACA (
32
)
18.3
0.0183
P8 GC+1d culture
AGGAGAAGTT (
4
)
8
0.008
P8 GC+1d culture
CCTGTAACCC (
5
)
4.6
0.0046
P8 GC+1d culture
GAATCCATAT (
2
)
2.3
0.0023
P8 GC+1d culture
TTGAACGACT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GTGGTTCACA (
32
)
31.6
0.0316
P8 GC+SHH+1d culture
GAATCCATAT (
2
)
1.2
0.0012
3T3 fibroblasts
GTGGTTCACA (
32
)
17.5
0.0175
3T3 fibroblasts
CCTGTAACCC (
5
)
3.5
0.0035
E15 cortex
GTGGTTCACA (
32
)
4.9
0.0049
P1 cortex
GTGGTTCACA (
32
)
27.3
0.0273
P1 cortex
AGGAGAAGTT (
4
)
4.5
0.0045
P1 cortex
CCTGTAACCC (
5
)
4.5
0.0045
Hypothalamus
GTGGTTCACA (
32
)
12.7
0.0127
Hypothalamus
CCTGTAACCC (
5
)
5.4
0.0054
Hypothalamus
AGGAGAAGTT (
4
)
3.6
0.0036
Hypothalamus
TAGAAACACA
(
2
)
3.6
0.0036
E12.5 retina
GTGGTTCACA (
32
)
28.2
0.0282
E14.5 retina
GTGGTTCACA (
32
)
51
0.051
E14.5 retina
AGGAGAAGTT (
4
)
3.6
0.0036
E14.5 retina
CCTGTAACCC (
5
)
3.6
0.0036
E16.5 retina
GTGGTTCACA (
32
)
39.8
0.0398
E16.5 retina
AGGAGAAGTT (
4
)
3.6
0.0036
E18.5 retina
GTGGTTCACA (
32
)
40
0.04
E18.5 retina
AGGAGAAGTT (
4
)
5.5
0.0055
P0.5 retina
GTGGTTCACA (
32
)
35.3
0.0353
P0.5 retina
AGGAGAAGTT (
4
)
7.9
0.0079
P0.5 retina
CCTGTAACCC (
5
)
7.9
0.0079
P2.5 retina
GTGGTTCACA (
32
)
12.3
0.0123
P2.5 retina
AGGAGAAGTT (
4
)
1.8
0.0018
P2.5 retina
CCTGTAACCC (
5
)
1.8
0.0018
P4.5 retina
GTGGTTCACA (
32
)
33.7
0.0337
P4.5 retina
CCTGTAACCC (
5
)
5.9
0.0059
P4.5 retina
AGGAGAAGTT (
4
)
4
0.004
P6.5 retina
GTGGTTCACA (
32
)
25
0.025
P6.5 retina
CCTGTAACCC (
5
)
3.3
0.0033
P10.5 crx- retina
GTGGTTCACA (
32
)
20.4
0.0204
P10.5 crx- retina
AGGAGAAGTT (
4
)
9.3
0.0093
P10.5 crx- retina
TTGAACGACT
(
2
)
3.7
0.0037
P10.5 crx- retina
CCTGTAACCC (
5
)
1.9
0.0019
P10.5 crx+ retina
GTGGTTCACA (
32
)
32.7
0.0327
P10.5 crx+ retina
AGGAGAAGTT (
4
)
5.8
0.0058
P10.5 crx+ retina
CCTGTAACCC (
5
)
3.8
0.0038
Adult retinal
GTGGTTCACA (
32
)
33.3
0.0333
Adult retinal
CCTGTAACCC (
5
)
5.6
0.0056
Adult retinal
AGGAGAAGTT (
4
)
1.9
0.0019
Adult retinal
TTGAACGACT
(
2
)
1.9
0.0019
ONL
GTGGTTCACA (
32
)
32.6
0.0326
ONL
CCTGTAACCC (
5
)
1.9
0.0019
ONL
GAATCCATAT (
2
)
1.9
0.0019
