Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.297903
9030406N13Rik
RIKEN cDNA 9030406N13 gene
10
211329
Mm.297903
6430403P17Rik
RIKEN cDNA 6430403P17 gene
10
77202
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 68 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCAATTGACA (
3
)
11.4
0.0114
P8 Cb GC
AAAGGCAAAG (
5
)
1.6
0.0016
P8 Cb GC
AAGTTGGGAG (
4
)
1.6
0.0016
P8 Cb GC
AATGTACAAG
(
6
)
1.6
0.0016
P8 Cb GC
GAAAAGACTG
(
10
)
1.6
0.0016
Cb medulloblastoma
GCAATTGACA (
3
)
13.9
0.0139
Cb medulloblastoma
TAATGATATT
(
3
)
2.3
0.0023
P8 GC+1d culture
GCAATTGACA (
3
)
18.3
0.0183
P8 GC+1d culture
AAGTTGGGAG (
4
)
2.3
0.0023
P8 GC+1d culture
AATGTACAAG
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GCAATTGACA (
3
)
11.7
0.0117
P8 GC+SHH+1d culture
TAATGATATT
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
GAAAAGACAA
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
AAGTTGGGAG (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
AATGTACAAG
(
6
)
1.2
0.0012
3T3 fibroblasts
AATGTACAAG
(
6
)
35
0.035
3T3 fibroblasts
AAAGGCAAAG (
5
)
3.5
0.0035
3T3 fibroblasts
GAAAAGACAA
(
5
)
3.5
0.0035
3T3 fibroblasts
TTCTTTTATT (
8
)
3.5
0.0035
E15 cortex
GCAATTGACA (
3
)
9.9
0.0099
P1 cortex
GCAATTGACA (
3
)
9.1
0.0091
P1 cortex
AAAGGCAAAG (
5
)
4.5
0.0045
Hypothalamus
GCAATTGACA (
3
)
3.6
0.0036
Hypothalamus
TAATGATATT
(
3
)
3.6
0.0036
Hypothalamus
AATGTACAAG
(
6
)
1.8
0.0018
Hypothalamus
TTCTTTTATT (
8
)
1.8
0.0018
E12.5 retina
GCAATTGACA (
3
)
18.8
0.0188
E12.5 retina
AAAGGCAAAG (
5
)
3.8
0.0038
E12.5 retina
GAAAAGACAA
(
5
)
1.9
0.0019
E14.5 retina
GCAATTGACA (
3
)
14.6
0.0146
E14.5 retina
AAGTTGGGAG (
4
)
3.6
0.0036
E16.5 retina
GCAATTGACA (
3
)
12.7
0.0127
E16.5 retina
GAAAAGACTG
(
10
)
3.6
0.0036
E16.5 retina
AATGAAATTG (
4
)
1.8
0.0018
E16.5 retina
TAATGATATT
(
3
)
1.8
0.0018
E18.5 retina
GCAATTGACA (
3
)
9.1
0.0091
E18.5 retina
TTCTTTTATT (
8
)
3.6
0.0036
E18.5 retina
TAATGATATT
(
3
)
1.8
0.0018
P0.5 retina
GAAAAGACAA
(
5
)
3.9
0.0039
P0.5 retina
GCAATTGACA (
3
)
3.9
0.0039
P0.5 retina
AATGAAATTG (
4
)
2
0.002
P2.5 retina
GCAATTGACA (
3
)
15.8
0.0158
P2.5 retina
AAGTTGGGAG (
4
)
1.8
0.0018
P2.5 retina
GAAAAGACAA
(
5
)
1.8
0.0018
P2.5 retina
TAATGATATT
(
3
)
1.8
0.0018
P4.5 retina
GCAATTGACA (
3
)
23.8
0.0238
P4.5 retina
AAGTTGGGAG (
4
)
5.9
0.0059
P4.5 retina
GAAAAGACAA
(
5
)
5.9
0.0059
P4.5 retina
AATGTACAAG
(
6
)
2
0.002
P4.5 retina
GAAAAGACTG
(
10
)
2
0.002
P6.5 retina
GCAATTGACA (
3
)
15
0.015
P6.5 retina
AATGTACAAG
(
6
)
1.7
0.0017
P10.5 crx- retina
GCAATTGACA (
3
)
22.3
0.0223
P10.5 crx- retina
AATGTACAAG
(
6
)
3.7
0.0037
P10.5 crx- retina
AATGAAATTG (
4
)
1.9
0.0019
P10.5 crx- retina
TAATGATATT
(
3
)
1.9
0.0019
P10.5 crx+ retina
GCAATTGACA (
3
)
32.7
0.0327
P10.5 crx+ retina
TAATGATATT
(
3
)
3.8
0.0038
P10.5 crx+ retina
AATGTACAAG
(
6
)
1.9
0.0019
P10.5 crx+ retina
TTCTTTTATT (
8
)
1.9
0.0019
Adult retinal
GCAATTGACA (
3
)
5.6
0.0056
Adult retinal
AAAGGCAAAG (
5
)
1.9
0.0019
Adult retinal
AAGTTGGGAG (
4
)
1.9
0.0019
Adult retinal
AATGTACAAG
(
6
)
1.9
0.0019
Adult retinal
GAAAAGACTG
(
10
)
1.9
0.0019
Adult retinal
TAATGATATT
(
3
)
1.9
0.0019
ONL
TAATGATATT
(
3
)
7.7
0.0077
ONL
GCAATTGACA (
3
)
5.7
0.0057
