Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.298003
Ppapdc1
phosphatidic acid phosphatase type 2 domain containing 1
8
71910
Human Homolog
HTPAP[HTPAP protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 25 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACCCCATTTA
(
2
)
CACAATCTCC
(
4
)
3.2
0.0032
Cb medulloblastoma
ATAACAGACG
2.3
0.0023
P8 GC+1d culture
ATAACAGACG
CACAATCTCC
(
4
)
2.2
0.0022
P8 GC+SHH+1d culture
CACAATCTCC
(
4
)
TGTTGCTGGG
2.4
0.0024
3T3 fibroblasts
CACAATCTCC
(
4
)
10.5
0.0105
E12.5 retina
AATGTAGGCA (
2
)
ACCCCATTTA
(
2
)
3.8
0.0038
E14.5 retina
AATGTAGGCA (
2
)
TGGGTTGCTG
3.6
0.0036
E16.5 retina
TGTTGCTGGG
1.8
0.0018
E18.5 retina
ACCCCATTTA
(
2
)
1.8
0.0018
P0.5 retina
CACAATCTCC
(
4
)
2
0.002
P2.5 retina
ACCCCATTTA
(
2
)
1.8
0.0018
P4.5 retina
AATGTAGGCA (
2
)
CACAATCTCC
(
4
)
6
0.006
P6.5 retina
CACAATCTCC
(
4
)
1.7
0.0017
P10.5 crx- retina
AATGTAGGCA (
2
)
ACCCCATTTA
(
2
)
ATAACAGACG
CACAATCTCC
(
4
)
TGGGTTGCTG
18.6
0.0186
ONL
TGGGTTGCTG
1.9
0.0019
