Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29810	Ddx56	DEAD (Asp-Glu-Ala-Asp) box polypeptide 56	11	11 3.0 cM	52513
Gene Ontology	ATP binding | ATP dependent helicase activity | helicase activity | hydrolase activity | nucleic acid binding | nucleolus | nucleus | ribosome biogenesis | RNA binding | rRNA processing
Human Homolog	DDX56[DEAD (Asp-Glu-Ala-Asp) box polypeptide 56]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 28 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGGAGGAA (5) 1.6 0.0016 P8 Cb GC TACCCCAGTC 1.6 0.0016 Cb medulloblastoma GTGGGAGGAA (5) 4.6 0.0046 Cb medulloblastoma TACCCCAGTC 2.3 0.0023 P8 GC+1d culture GTGGGAGGAA (5) 6.8 0.0068 P8 GC+SHH+1d culture GTGGGAGGAA (5) 4.7 0.0047 P8 GC+SHH+1d culture TTCACATTTA (9) 1.2 0.0012 3T3 fibroblasts GTGGGAGGAA (5) 7 0.007 E15 cortex TACCCCAGTC 4.9 0.0049 P1 cortex GTGGGAGGAA (5) 4.5 0.0045 P1 cortex TTCACATTTA (9) 4.5 0.0045 Hypothalamus GAAGACAGCA (5) 1.8 0.0018 Hypothalamus GTGGGAGGAA (5) 1.8 0.0018 E12.5 retina GTGGGAGGAA (5) 18.8 0.0188 E12.5 retina TACCCCAGTC 1.9 0.0019 E14.5 retina GTGGGAGGAA (5) 7.3 0.0073 E14.5 retina TTCACATTTA (9) 1.8 0.0018 E16.5 retina GTGGGAGGAA (5) 10.9 0.0109 P0.5 retina GTGGGAGGAA (5) 9.8 0.0098 P0.5 retina GAAGACAGCA (5) 2 0.002 P2.5 retina GTGGGAGGAA (5) 7 0.007 P2.5 retina GAAGACAGCA (5) 3.5 0.0035 P4.5 retina GTGGGAGGAA (5) 7.9 0.0079 P6.5 retina GTGGGAGGAA (5) 13.3 0.0133 P10.5 crx- retina GTGGGAGGAA (5) 3.7 0.0037 P10.5 crx+ retina GTGGGAGGAA (5) 7.7 0.0077 Adult retinal GTGGGAGGAA (5) 3.7 0.0037 ONL GTGGGAGGAA (5) 1.9 0.0019