Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29821	Prdx3	peroxiredoxin 3	19	19 50.0 cM	11757
Gene Ontology	antioxidant activity | extracellular space | mitochondrion | oxidoreductase activity | peroxidase activity
Human Homolog	PRDX3[peroxiredoxin 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGAAAGTCT (4) 32.6 0.0326 P8 Cb GC GAGAAGTCTG (10) 24.5 0.0245 P8 Cb GC AAGGACTATG (5) 6.5 0.0065 P8 Cb GC TGGAAAAAAA (27) 3.3 0.0033 P8 Cb GC TCCTTAGAGG (2) 1.6 0.0016 Cb medulloblastoma TGGAAAAAAA (27) 25.4 0.0254 Cb medulloblastoma AAGGACTATG (5) 11.6 0.0116 Cb medulloblastoma GAGAAGTCTG (10) 9.2 0.0092 Cb medulloblastoma CCTTGAAGAT (2) 4.6 0.0046 P8 GC+1d culture GAGAAAGTCT (4) 77.6 0.0776 P8 GC+1d culture GAGAAGTCTG (10) 9.1 0.0091 P8 GC+1d culture AAGGACTATG (5) 6.8 0.0068 P8 GC+1d culture TGGAAAAAAA (27) 2.3 0.0023 P8 GC+SHH+1d culture GAGAAAGTCT (4) 63.2 0.0632 P8 GC+SHH+1d culture GAGAAGTCTG (10) 23.4 0.0234 P8 GC+SHH+1d culture TGGAAAAAAA (27) 11.7 0.0117 P8 GC+SHH+1d culture AAGGACTATG (5) 5.9 0.0059 P8 GC+SHH+1d culture CCTTGAAGAT (2) 1.2 0.0012 3T3 fibroblasts GAGAAGTCTG (10) 10.5 0.0105 3T3 fibroblasts GAGAAAGTCT (4) 7 0.007 E15 cortex GAGAAAGTCT (4) 59.4 0.0594 E15 cortex TGGAAAAAAA (27) 4.9 0.0049 P1 cortex GAGAAAGTCT (4) 13.6 0.0136 P1 cortex AAGGACTATG (5) 4.5 0.0045 Hypothalamus AAGGACTATG (5) 9.1 0.0091 Hypothalamus GAGAAAGTCT (4) 9.1 0.0091 Hypothalamus GAGAAGTCTG (10) 5.4 0.0054 Hypothalamus ATTATACCTC 1.8 0.0018 Hypothalamus TGGAAAAAAA (27) 1.8 0.0018 E12.5 retina GAGAAAGTCT (4) 58.2 0.0582 E12.5 retina GAGAAGTCTG (10) 7.5 0.0075 E12.5 retina AAGGACTATG (5) 5.6 0.0056 E12.5 retina TGGAAAAAAA (27) 5.6 0.0056 E12.5 retina ATTATACCTC 1.9 0.0019 E14.5 retina GAGAAAGTCT (4) 40.1 0.0401 E14.5 retina TGGAAAAAAA (27) 10.9 0.0109 E14.5 retina GAGAAGTCTG (10) 9.1 0.0091 E14.5 retina AAGGACTATG (5) 3.6 0.0036 E14.5 retina ATTATACCTC 1.8 0.0018 E14.5 retina CCTTGAAGAT (2) 1.8 0.0018 E16.5 retina GAGAAAGTCT (4) 50.7 0.0507 E16.5 retina GAGAAGTCTG (10) 30.8 0.0308 E16.5 retina AAGGACTATG (5) 5.4 0.0054 E16.5 retina TGGAAAAAAA (27) 3.6 0.0036 E16.5 retina ATTATACCTC 1.8 0.0018 E18.5 retina GAGAAAGTCT (4) 54.6 0.0546 E18.5 retina TGGAAAAAAA (27) 18.2 0.0182 E18.5 retina GAGAAGTCTG (10) 12.7 0.0127 E18.5 retina AAGGACTATG (5) 5.5 0.0055 E18.5 retina CCTTGAAGAT (2) 1.8 0.0018 P0.5 retina GAGAAAGTCT (4) 39.3 0.0393 P0.5 retina GAGAAGTCTG (10) 13.7 0.0137 P0.5 retina TGGAAAAAAA (27) 11.8 0.0118 P0.5 retina AAGGACTATG (5) 3.9 0.0039 P0.5 retina ATTATACCTC 2 0.002 P0.5 retina CCTTGAAGAT (2) 2 0.002 P2.5 retina GAGAAAGTCT (4) 47.5 0.0475 P2.5 retina GAGAAGTCTG (10) 14.1 0.0141 P2.5 retina TGGAAAAAAA (27) 10.6 0.0106 P2.5 retina CCTTGAAGAT (2) 3.5 0.0035 P2.5 retina AAGGACTATG (5) 1.8 0.0018 P4.5 retina GAGAAAGTCT (4) 55.5 0.0555 P4.5 retina AAGGACTATG (5) 4 0.004 P4.5 retina GAGAAGTCTG (10) 4 0.004 P4.5 retina ATTATACCTC 2 0.002 P4.5 retina CCTTGAAGAT (2) 2 0.002 P4.5 retina TCCTTAGAGG (2) 2 0.002 P4.5 retina TGGAAAAAAA (27) 2 0.002 P6.5 retina GAGAAAGTCT (4) 21.7 0.0217 P6.5 retina CCTTGAAGAT (2) 6.7 0.0067 P6.5 retina GAGAAGTCTG (10) 5 0.005 P6.5 retina TGGAAAAAAA (27) 5 0.005 P6.5 retina AAGGACTATG (5) 1.7 0.0017 P6.5 retina TCCTTAGAGG (2) 1.7 0.0017 P10.5 crx- retina AAGGACTATG (5) 11.1 0.0111 P10.5 crx- retina CCTTGAAGAT (2) 9.3 0.0093 P10.5 crx- retina GAGAAAGTCT (4) 9.3 0.0093 P10.5 crx- retina GAGAAGTCTG (10) 5.6 0.0056 P10.5 crx- retina ATTATACCTC 3.7 0.0037 P10.5 crx- retina TGGAAAAAAA (27) 3.7 0.0037 P10.5 crx+ retina GAGAAAGTCT (4) 11.5 0.0115 P10.5 crx+ retina AAGGACTATG (5) 7.7 0.0077 P10.5 crx+ retina CCTTGAAGAT (2) 7.7 0.0077 P10.5 crx+ retina TGGAAAAAAA (27) 5.8 0.0058 P10.5 crx+ retina ATTATACCTC 3.8 0.0038 P10.5 crx+ retina GAGAAGTCTG (10) 1.9 0.0019 P10.5 crx+ retina TCCTTAGAGG (2) 1.9 0.0019 Adult retinal AAGGACTATG (5) 3.7 0.0037 Adult retinal TGGAAAAAAA (27) 3.7 0.0037 Adult retinal CCTTGAAGAT (2) 1.9 0.0019 Adult retinal GAGAAGTCTG (10) 1.9 0.0019 Adult retinal TCCTTAGAGG (2) 1.9 0.0019 ONL GAGAAAGTCT (4) 3.8 0.0038