Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.298256
Ramp2
receptor (calcitonin) activity modifying protein 2
11
11 61.5 cM
54409
Mm.298256
9430072K23Rik
RIKEN cDNA 9430072K23 gene
19
77292
Mm.298256
2210401K01Rik
RIKEN cDNA 2210401K01 gene
19
72289
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 188 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTAAAAAAAA (
80
)
13.1
0.0131
P8 Cb GC
TAACTGACAA
(
6
)
4.9
0.0049
P8 Cb GC
AAGGCTTATT
(
5
)
3.3
0.0033
P8 Cb GC
GGCCTTTTGG (
8
)
3.3
0.0033
P8 Cb GC
GTGGTGGTTT
(
10
)
3.3
0.0033
P8 Cb GC
TGAAGAAAAA (
8
)
3.3
0.0033
P8 Cb GC
TTAGGGATAG
(
3
)
3.3
0.0033
P8 Cb GC
AAAGGGATCA
(
6
)
1.6
0.0016
P8 Cb GC
ACCTGAAGTC
(
4
)
1.6
0.0016
P8 Cb GC
GCGGAATTGC
(
6
)
1.6
0.0016
P8 Cb GC
GTGAAGATAG
(
4
)
1.6
0.0016
P8 Cb GC
GTGCCAAGGT
(
4
)
1.6
0.0016
Cb medulloblastoma
TAACTGACAA
(
6
)
106.4
0.1064
Cb medulloblastoma
TTAAAAAAAA (
80
)
53.2
0.0532
Cb medulloblastoma
AAGGCTTATT
(
5
)
4.6
0.0046
Cb medulloblastoma
AAAGCCCATC
(
3
)
2.3
0.0023
Cb medulloblastoma
ACATTATTTT
(
5
)
2.3
0.0023
Cb medulloblastoma
ACCTGAAGTC
(
4
)
2.3
0.0023
Cb medulloblastoma
ACTACCCAGG (
5
)
2.3
0.0023
Cb medulloblastoma
GGCCTTGGGC (
4
)
2.3
0.0023
Cb medulloblastoma
GTGAAGATAG
(
4
)
2.3
0.0023
Cb medulloblastoma
GTGCCAAGGT
(
4
)
2.3
0.0023
Cb medulloblastoma
TGAAGAAAAA (
8
)
2.3
0.0023
P8 GC+1d culture
TTAAAAAAAA (
80
)
28.5
0.0285
P8 GC+1d culture
TAACTGACAA
(
6
)
26.3
0.0263
P8 GC+1d culture
CTGTCTTCTG (
11
)
3.4
0.0034
P8 GC+1d culture
TGCCATCACC (
6
)
3.4
0.0034
P8 GC+1d culture
ATATTTTTGT (
4
)
2.3
0.0023
P8 GC+1d culture
TGAAGAAAAA (
8
)
2.3
0.0023
P8 GC+1d culture
CAATACTGCA
(
3
)
1.1
0.0011
P8 GC+1d culture
CCCATTATTC (
4
)
1.1
0.0011
P8 GC+1d culture
GGCCTTGGGC (
4
)
1.1
0.0011
P8 GC+1d culture
GTTACCTTGA
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TTAAAAAAAA (
80
)
34
0.034
P8 GC+SHH+1d culture
TAACTGACAA
(
6
)
21.1
0.0211
P8 GC+SHH+1d culture
CTGTCTTCTG (
11
)
3.5
0.0035
P8 GC+SHH+1d culture
ATATTTTTGT (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TGCCATCACC (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
CAGTGATGAG
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
CCCATTATTC (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GGCCTTGGGC (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GTTACCTTGA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGGTTTAAA (
7
)
1.2
0.0012
3T3 fibroblasts
GTGCCAAGGT
(
4
)
10.5
0.0105
3T3 fibroblasts
GAGCTGCTCA
(
9
)
7
0.007
3T3 fibroblasts
AAGGCTTATT
(
5
)
3.5
0.0035
3T3 fibroblasts
CAGGAACATT
(
6
)
3.5
0.0035
3T3 fibroblasts
GCGTGGTGGA (
7
)
3.5
0.0035
3T3 fibroblasts
GTGGTGGTTT
(
10
)
3.5
0.0035
3T3 fibroblasts
TAACTGACAA
(
6
)
3.5
0.0035
E15 cortex
AGCCAGAGAT
(
4
)
19.8
0.0198
E15 cortex
AAGGCTTATT
(
5
)
9.9
0.0099
E15 cortex
AGTTGGAAAC
(
4
)
4.9
0.0049
E15 cortex
GAGCTGCTCA
(
9
)
4.9
0.0049
E15 cortex
TAACTGACAA
(
6
)
4.9
0.0049
E15 cortex
TTAAAAAAAA (
80
)
4.9
0.0049
P1 cortex
TTAAAAAAAA (
80
)
13.6
0.0136
P1 cortex
GGCCTTGGGC (
4
)
4.5
0.0045
P1 cortex
GGGTGGGGAG (
9
)
4.5
0.0045
Hypothalamus
TAACTGACAA
(
6
)
101.4
0.1014
Hypothalamus
TTAAAAAAAA (
80
)
19.9
0.0199
Hypothalamus
GAGCTGCTCA
(
9
)
3.6
0.0036
Hypothalamus
ACCTGAAGTC
(
4
)
1.8
0.0018
Hypothalamus
ACTACCCAGG (
5
)
1.8
0.0018
Hypothalamus
AGGCCATTAC
(
3
)
1.8
0.0018
Hypothalamus
CAAAATGCTG (
4
)
1.8
0.0018
Hypothalamus
CTGTCTTCTG (
11
)
1.8
0.0018
Hypothalamus
GCGGAATTGC
(
6
)
1.8
0.0018
Hypothalamus
TGCCATCACC (
6
)
1.8
0.0018
E12.5 retina
TTAAAAAAAA (
80
)
11.3
0.0113
E12.5 retina
AGGCCATTAC
(
3
)
1.9
0.0019
E12.5 retina
CAGTGATGAG
(
3
)
1.9
0.0019
E12.5 retina
CTGTCTTCTG (
11
)
1.9
0.0019
E12.5 retina
TGCCATCACC (
6
)
1.9
0.0019
E12.5 retina
TGGGTTTAAA (
7
)
1.9
0.0019
E14.5 retina
TTAAAAAAAA (
80
)
16.4
0.0164
E14.5 retina
TGCCATCACC (
6
)
5.5
0.0055
E14.5 retina
AAAGCCCATC
(
3
)
1.8
0.0018
E14.5 retina
AAAGGGATCA
(
6
)
1.8
0.0018
E14.5 retina
ATATTTTTGT (
4
)
1.8
0.0018
E14.5 retina
GGGTGGGGAG (
9
)
1.8
0.0018
E16.5 retina
TTAAAAAAAA (
80
)
16.3
0.0163
E16.5 retina
TGCCATCACC (
6
)
7.2
0.0072
E16.5 retina
GCGTGGTGGA (
7
)
3.6
0.0036
E16.5 retina
TAACTGACAA
(
6
)
3.6
0.0036
E16.5 retina
ACATTATTTT
(
5
)
1.8
0.0018
E16.5 retina
AGCCAGAGAT
(
4
)
1.8
0.0018
E16.5 retina
ATATTTTTGT (
4
)
1.8
0.0018
E16.5 retina
CCCATTATTC (
4
)
1.8
0.0018
E16.5 retina
CTGTCTTCTG (
11
)
1.8
0.0018
E16.5 retina
GGCCTTGGGC (
4
)
1.8
0.0018
E16.5 retina
GTTACCTTGA
(
4
)
1.8
0.0018
E18.5 retina
TTAAAAAAAA (
80
)
50.9
0.0509
E18.5 retina
TGCCATCACC (
6
)
7.3
0.0073
E18.5 retina
AAAGGGATCA
(
6
)
5.5
0.0055
E18.5 retina
TAACTGACAA
(
6
)
3.6
0.0036
E18.5 retina
AAGGCTTATT
(
5
)
1.8
0.0018
E18.5 retina
ACTACCCAGG (
5
)
1.8
0.0018
E18.5 retina
AGTTGGAAAC
(
4
)
1.8
0.0018
E18.5 retina
CTGTCTTCTG (
11
)
1.8
0.0018
E18.5 retina
GTGAAGATAG
(
4
)
1.8
0.0018
E18.5 retina
GTGCCAAGGT
(
4
)
1.8
0.0018
E18.5 retina
GTTACCTTGA
(
4
)
1.8
0.0018
E18.5 retina
TGAAGAAAAA (
8
)
1.8
0.0018
P0.5 retina
TTAAAAAAAA (
80
)
17.7
0.0177
P0.5 retina
AGGCCATTAC
(
3
)
3.9
0.0039
P0.5 retina
GCGGAATTGC
(
6
)
3.9
0.0039
P0.5 retina
GGCCTTTGGC
(
4
)
3.9
0.0039
P0.5 retina
TAACTGACAA
(
6
)
3.9
0.0039
P0.5 retina
TGCCATCACC (
6
)
3.9
0.0039
P0.5 retina
AAAGGGATCA
(
6
)
2
0.002
P0.5 retina
AGCCAGAGAT
(
4
)
2
0.002
P0.5 retina
AGTTGGAAAC
(
4
)
2
0.002
P0.5 retina
ATATTTTTGT (
4
)
2
0.002
P0.5 retina
CCCATTATTC (
4
)
2
0.002
P0.5 retina
CTGTCTTCTG (
11
)
2
0.002
P0.5 retina
GCGTGGTGGA (
7
)
2
0.002
P2.5 retina
TTAAAAAAAA (
80
)
40.5
0.0405
P2.5 retina
AAAGGGATCA
(
6
)
5.3
0.0053
P2.5 retina
AAGGCTTATT
(
5
)
5.3
0.0053
P2.5 retina
GGCCTTTGGC
(
4
)
5.3
0.0053
P2.5 retina
TGCCATCACC (
6
)
5.3
0.0053
P2.5 retina
CAAAATGCTG (
4
)
3.5
0.0035
P2.5 retina
ACCTGAAGTC
(
4
)
1.8
0.0018
P2.5 retina
CAATACTGCA
(
3
)
1.8
0.0018
P2.5 retina
GGGTGGGGAG (
9
)
1.8
0.0018
P2.5 retina
TAACTGACAA
(
6
)
1.8
0.0018
P4.5 retina
TTAAAAAAAA (
80
)
47.6
0.0476
P4.5 retina
TAACTGACAA
(
6
)
19.8
0.0198
P4.5 retina
TGCCATCACC (
6
)
15.9
0.0159
P4.5 retina
AAGGCTTATT
(
5
)
7.9
0.0079
P4.5 retina
AAAGGGATCA
(
6
)
5.9
0.0059
P4.5 retina
ACCTGAAGTC
(
4
)
2
0.002
P4.5 retina
GCGGAATTGC
(
6
)
2
0.002
P4.5 retina
GTGAAGATAG
(
4
)
2
0.002
P4.5 retina
GTGGTGGTTT
(
10
)
2
0.002
P6.5 retina
TTAAAAAAAA (
80
)
16.7
0.0167
P6.5 retina
AAAGGGATCA
(
6
)
8.3
0.0083
P6.5 retina
TGCCATCACC (
6
)
6.7
0.0067
P6.5 retina
AAAGCCCATC
(
3
)
3.3
0.0033
P6.5 retina
TAACTGACAA
(
6
)
3.3
0.0033
P6.5 retina
AAGGCTTATT
(
5
)
1.7
0.0017
P6.5 retina
ACCTGAAGTC
(
4
)
1.7
0.0017
P6.5 retina
AGCCAGAGAT
(
4
)
1.7
0.0017
P6.5 retina
AGTTGGAAAC
(
4
)
1.7
0.0017
P6.5 retina
CAATACTGCA
(
3
)
1.7
0.0017
P6.5 retina
GGCCTTTGGC
(
4
)
1.7
0.0017
P6.5 retina
TTAGGGATAG
(
3
)
1.7
0.0017
P10.5 crx- retina
TTAAAAAAAA (
80
)
13
0.013
P10.5 crx- retina
AAAGGGATCA
(
6
)
11.1
0.0111
P10.5 crx- retina
AAGGCTTATT
(
5
)
3.7
0.0037
P10.5 crx- retina
ACTACCCAGG (
5
)
3.7
0.0037
P10.5 crx- retina
CTGTCTTCTG (
11
)
3.7
0.0037
P10.5 crx- retina
CAGGAACATT
(
6
)
1.9
0.0019
P10.5 crx- retina
CCCATTATTC (
4
)
1.9
0.0019
P10.5 crx- retina
GAGCTGCTCA
(
9
)
1.9
0.0019
P10.5 crx- retina
GGCCTTGGGC (
4
)
1.9
0.0019
P10.5 crx- retina
GTGCCAAGGT
(
4
)
1.9
0.0019
P10.5 crx- retina
GTGGTGGTTT
(
10
)
1.9
0.0019
P10.5 crx- retina
TGGGTTTAAA (
7
)
1.9
0.0019
P10.5 crx+ retina
AAAGCCCATC
(
3
)
7.7
0.0077
P10.5 crx+ retina
ACCTGAAGTC
(
4
)
5.8
0.0058
P10.5 crx+ retina
TTAAAAAAAA (
80
)
5.8
0.0058
P10.5 crx+ retina
AAGGCTTATT
(
5
)
3.8
0.0038
P10.5 crx+ retina
ACATTATTTT
(
5
)
3.8
0.0038
P10.5 crx+ retina
CAGTGATGAG
(
3
)
3.8
0.0038
P10.5 crx+ retina
TAACTGACAA
(
6
)
3.8
0.0038
P10.5 crx+ retina
TGCCATCACC (
6
)
3.8
0.0038
P10.5 crx+ retina
AAAGGGATCA
(
6
)
1.9
0.0019
P10.5 crx+ retina
GGCCTTTTGG (
8
)
1.9
0.0019
P10.5 crx+ retina
TTAGGGATAG
(
3
)
1.9
0.0019
Adult retinal
TAACTGACAA
(
6
)
7.4
0.0074
Adult retinal
TGCCATCACC (
6
)
7.4
0.0074
Adult retinal
TTAAAAAAAA (
80
)
7.4
0.0074
Adult retinal
AAAGGGATCA
(
6
)
3.7
0.0037
Adult retinal
AAAGCCCATC
(
3
)
1.9
0.0019
Adult retinal
ACATTATTTT
(
5
)
1.9
0.0019
Adult retinal
AGTTGGAAAC
(
4
)
1.9
0.0019
Adult retinal
CTGTCTTCTG (
11
)
1.9
0.0019
Adult retinal
GCGGAATTGC
(
6
)
1.9
0.0019
ONL
TAACTGACAA
(
6
)
9.6
0.0096
ONL
TTAAAAAAAA (
80
)
7.7
0.0077
ONL
GCGGAATTGC
(
6
)
3.8
0.0038
ONL
AAAGGGATCA
(
6
)
1.9
0.0019
ONL
ACATTATTTT
(
5
)
1.9
0.0019
ONL
ACCTGAAGTC
(
4
)
1.9
0.0019
ONL
AGGCCATTAC
(
3
)
1.9
0.0019
ONL
TGCCATCACC (
6
)
1.9
0.0019
