Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29829	Rab5c	RAB5C, member RAS oncogene family	11	11 60.0 cM	19345
Gene Ontology	endocytic vesicle | endosome organization and biogenesis | GTP binding | GTPase activity | GTPase activity | protein transport | regulation of endocytosis | small GTPase mediated signal transduction
Human Homolog	RAB5C[RAB5C, member RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGAAGAAAA TAACCAATCA 21.2 0.0212 Cb medulloblastoma GCAATAGCTA TAACCAATCA 23.1 0.0231 P8 GC+1d culture GTAACCAAAA (2) GTGAAGAAAA TAACCAATCA 28.6 0.0286 P8 GC+SHH+1d culture GCAATAGCTA GTAACCAAAA (2) GTGAAGAAAA TAACCAATCA 33.9 0.0339 3T3 fibroblasts GTAACCAAAA (2) 3.5 0.0035 E15 cortex TAACCAATCA 9.9 0.0099 P1 cortex TAACCAATCA 9.1 0.0091 Hypothalamus GTAACCAAAA (2) GTGAAGAAAA TAACCAATCA 30.7 0.0307 E12.5 retina GCAATAGCTA GTAACCAAAA (2) TAACCAATCA 18.8 0.0188 E14.5 retina GTGAAGAAAA TAACCAATCA 32.8 0.0328 E16.5 retina GTAACCAAAA (2) GTGAAGAAAA TAACCAATCA 21.7 0.0217 E18.5 retina GTGAAGAAAA TAACCAATCA 29.1 0.0291 P0.5 retina GTAACCAAAA (2) TAACCAATCA 23.6 0.0236 P2.5 retina GTAACCAAAA (2) GTGAAGAAAA TAACCAATCA 45.8 0.0458 P4.5 retina GTAACCAAAA (2) TAACCAATCA 31.7 0.0317 P6.5 retina GTGAAGAAAA TAACCAATCA 36.7 0.0367 P10.5 crx- retina TAACCAATCA 31.6 0.0316 P10.5 crx+ retina GTGAAGAAAA TAACCAATCA 28.8 0.0288 Adult retinal TAACCAATCA 11.1 0.0111 ONL GTAACCAAAA (2) TAACCAATCA 21 0.021