Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29846
Ndrg4
N-myc downstream regulated gene 4
8
8 50.0 cM (8 50.0 cM)
234593
Human Homolog
NDRG4[NDRG family member 4]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 16 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 61 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGACCTGTAA (
2
)
3.3
0.0033
P8 Cb GC
CAATGTTACA (
4
)
1.6
0.0016
P8 Cb GC
CCGCCCCTTT
(
5
)
1.6
0.0016
P8 Cb GC
GAGGTCTGCG
(
3
)
1.6
0.0016
Cb medulloblastoma
CCGCCCCTTT
(
5
)
23.1
0.0231
Cb medulloblastoma
AGACCTGTAA (
2
)
4.6
0.0046
Cb medulloblastoma
GGGGCAGGAA
(
2
)
2.3
0.0023
P8 GC+1d culture
AGACCTGTAA (
2
)
6.8
0.0068
P8 GC+1d culture
CCGCCCCTTT
(
5
)
3.4
0.0034
P8 GC+1d culture
CAATGTTACA (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AGACCTGTAA (
2
)
5.9
0.0059
P8 GC+SHH+1d culture
CCGCCCCTTT
(
5
)
2.3
0.0023
P1 cortex
CCGCCCCTTT
(
5
)
27.3
0.0273
Hypothalamus
CCGCCCCTTT
(
5
)
16.3
0.0163
Hypothalamus
CAATGTTACA (
4
)
1.8
0.0018
Hypothalamus
GAGGTCTGCG
(
3
)
1.8
0.0018
Hypothalamus
GGGGCAGGAA
(
2
)
1.8
0.0018
Hypothalamus
TTACAACCGG
1.8
0.0018
E12.5 retina
CAATGTTACA (
4
)
13.1
0.0131
E12.5 retina
AGACCTGTAA (
2
)
7.5
0.0075
E12.5 retina
CAGGAAAGAG (
4
)
1.9
0.0019
E14.5 retina
CAATGTTACA (
4
)
5.5
0.0055
E14.5 retina
AGACCTGTAA (
2
)
1.8
0.0018
E14.5 retina
TTACAACCGG
1.8
0.0018
E16.5 retina
AGACCTGTAA (
2
)
16.3
0.0163
E16.5 retina
CAATGTTACA (
4
)
3.6
0.0036
E16.5 retina
AGGATGGTAG
(
3
)
1.8
0.0018
E18.5 retina
AGACCTGTAA (
2
)
10.9
0.0109
E18.5 retina
CAATGTTACA (
4
)
7.3
0.0073
E18.5 retina
TTACAACCGG
3.6
0.0036
E18.5 retina
CAGGAAAGAG (
4
)
1.8
0.0018
E18.5 retina
CCGCCCCTTT
(
5
)
1.8
0.0018
P0.5 retina
CCGCCCCTTT
(
5
)
9.8
0.0098
P0.5 retina
AGACCTGTAA (
2
)
7.9
0.0079
P0.5 retina
CAATGTTACA (
4
)
3.9
0.0039
P0.5 retina
CAGGAAAGAG (
4
)
2
0.002
P0.5 retina
TTACAACCGG
2
0.002
P2.5 retina
AGACCTGTAA (
2
)
12.3
0.0123
P2.5 retina
CAATGTTACA (
4
)
1.8
0.0018
P2.5 retina
CCGCCCCTTT
(
5
)
1.8
0.0018
P4.5 retina
AGACCTGTAA (
2
)
9.9
0.0099
P4.5 retina
CAATGTTACA (
4
)
5.9
0.0059
P4.5 retina
CCGCCCCTTT
(
5
)
2
0.002
P6.5 retina
AGACCTGTAA (
2
)
3.3
0.0033
P6.5 retina
CCGCCCCTTT
(
5
)
3.3
0.0033
P10.5 crx- retina
CCGCCCCTTT
(
5
)
16.7
0.0167
P10.5 crx- retina
AGACCTGTAA (
2
)
3.7
0.0037
P10.5 crx- retina
TTACAACCGG
1.9
0.0019
P10.5 crx+ retina
CCGCCCCTTT
(
5
)
15.4
0.0154
P10.5 crx+ retina
AGACCTGTAA (
2
)
3.8
0.0038
P10.5 crx+ retina
AGGATGGTAG
(
3
)
1.9
0.0019
P10.5 crx+ retina
CAGGAAAGAG (
4
)
1.9
0.0019
Adult retinal
CCGCCCCTTT
(
5
)
31.5
0.0315
Adult retinal
AGACCTGTAA (
2
)
5.6
0.0056
Adult retinal
CCGCCCTTTT
5.6
0.0056
Adult retinal
GGGGCAGGAA
(
2
)
3.7
0.0037
Adult retinal
AGGATGGTAG
(
3
)
1.9
0.0019
Adult retinal
CAATGTTACA (
4
)
1.9
0.0019
Adult retinal
GAGGTCTGCG
(
3
)
1.9
0.0019
ONL
CCGCCCCTTT
(
5
)
3.8
0.0038
ONL
AGACCTGTAA (
2
)
1.9
0.0019
