Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.298467	Rpl31	ribosomal protein L31	1		114641
Gene Ontology	intracellular | protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	RPL31[ribosomal protein L31]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 115 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGAAATGG (2) 34.3 0.0343 P8 Cb GC AAGGAGATGG (7) 9.8 0.0098 P8 Cb GC GATGCGCTTG 9.8 0.0098 P8 Cb GC TGCACACAGA (6) 6.5 0.0065 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 Cb medulloblastoma AAGGAAATGG (2) 11.6 0.0116 Cb medulloblastoma GATGCGCTTG 4.6 0.0046 Cb medulloblastoma CCTTTAATGT (4) 2.3 0.0023 Cb medulloblastoma GGAAATTAGA (3) 2.3 0.0023 Cb medulloblastoma TGCACACAGA (6) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture AAGGAAATGG (2) 24 0.024 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture GATGCGCTTG 4.6 0.0046 P8 GC+1d culture TGCACACAGA (6) 4.6 0.0046 P8 GC+1d culture AAGGAGATGG (7) 2.3 0.0023 P8 GC+1d culture CCTTTAATGT (4) 1.1 0.0011 P8 GC+1d culture GAGTGGGCTT (4) 1.1 0.0011 P8 GC+1d culture GGAGTAAGGA (2) 1.1 0.0011 P8 GC+SHH+1d culture AAGGAAATGG (2) 30.4 0.0304 P8 GC+SHH+1d culture GATGCGCTTG 12.9 0.0129 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture GAGTGGGCTT (4) 3.5 0.0035 P8 GC+SHH+1d culture AAGGAGATGG (7) 1.2 0.0012 P8 GC+SHH+1d culture CCTTTAATGT (4) 1.2 0.0012 P8 GC+SHH+1d culture GGAGTAAGGA (2) 1.2 0.0012 3T3 fibroblasts GATGCGCTTG 17.5 0.0175 3T3 fibroblasts AAGGAAATGG (2) 14 0.014 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TGCACACAGA (6) 7 0.007 E15 cortex AAGGAAATGG (2) 44.5 0.0445 E15 cortex GAGTGGGCTT (4) 9.9 0.0099 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TGCACACAGA (6) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex AAGGAAATGG (2) 36.4 0.0364 P1 cortex GATGCGCTTG 13.6 0.0136 P1 cortex TGCACACAGA (6) 9.1 0.0091 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus AAGGAAATGG (2) 25.4 0.0254 Hypothalamus GATGCGCTTG 12.7 0.0127 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus CCTTTAATGT (4) 3.6 0.0036 Hypothalamus TGCACACAGA (6) 3.6 0.0036 E12.5 retina AAGGAAATGG (2) 33.8 0.0338 E12.5 retina GATGCGCTTG 24.4 0.0244 E12.5 retina TGCACACAGA (6) 11.3 0.0113 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina GGAAATTAGA (3) 1.9 0.0019 E14.5 retina AAGGAAATGG (2) 27.3 0.0273 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina GAGTGGGCTT (4) 9.1 0.0091 E14.5 retina GATGCGCTTG 9.1 0.0091 E14.5 retina GGAAATTAGA (3) 3.6 0.0036 E14.5 retina TGCACACAGA (6) 3.6 0.0036 E14.5 retina GATTGGCTTG 1.8 0.0018 E16.5 retina AAGGAAATGG (2) 43.5 0.0435 E16.5 retina GAGTGGGCTT (4) 18.1 0.0181 E16.5 retina GATGCGCTTG 12.7 0.0127 E16.5 retina TGCACACAGA (6) 5.4 0.0054 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina GGAAATTAGA (3) 1.8 0.0018 E18.5 retina GATGCGCTTG 16.4 0.0164 E18.5 retina AAGGAAATGG (2) 14.6 0.0146 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina GGAAATTAGA (3) 5.5 0.0055 E18.5 retina AAGGAGATGG (7) 3.6 0.0036 E18.5 retina GAGTGGGCTT (4) 1.8 0.0018 P0.5 retina AAGGAAATGG (2) 33.4 0.0334 P0.5 retina GATGCGCTTG 13.7 0.0137 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina TGCACACAGA (6) 7.9 0.0079 P0.5 retina GGAGTAAGGA (2) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P2.5 retina GATGCGCTTG 12.3 0.0123 P2.5 retina AAGGAAATGG (2) 8.8 0.0088 P2.5 retina TGCACACAGA (6) 7 0.007 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina CCTTTAATGT (4) 5.3 0.0053 P2.5 retina GAGTGGGCTT (4) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina GATGCGCTTG 9.9 0.0099 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina GATTGGCTTG 2 0.002 P4.5 retina GGAAATTAGA (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina GATGCGCTTG 11.7 0.0117 P6.5 retina AAGGAAATGG (2) 10 0.01 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina TTTTTGTAAG (5) 6.7 0.0067 P6.5 retina CCTTTAATGT (4) 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P10.5 crx- retina AAGGAAATGG (2) 18.6 0.0186 P10.5 crx- retina TGCACACAGA (6) 11.1 0.0111 P10.5 crx- retina AAGGAGATGG (7) 1.9 0.0019 P10.5 crx- retina GAGTGGGCTT (4) 1.9 0.0019 P10.5 crx+ retina TGCACACAGA (6) 9.6 0.0096 P10.5 crx+ retina GATGCGCTTG 7.7 0.0077 P10.5 crx+ retina AAGGAAATGG (2) 5.8 0.0058 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina CCTTTAATGT (4) 1.9 0.0019 P10.5 crx+ retina TTTTTGTAAG (5) 1.9 0.0019 Adult retinal GATGCGCTTG 13 0.013 Adult retinal TGCACACAGA (6) 13 0.013 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal AAGGAAATGG (2) 3.7 0.0037 Adult retinal CCTTTAATGT (4) 1.9 0.0019 Adult retinal GAGTGGGCTT (4) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL AAGGAAATGG (2) 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GAGTGGGCTT (4) 3.8 0.0038 ONL TGCACACAGA (6) 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL GATTGGCTTG 1.9 0.0019