Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.298486
Tes3
testis derived transcript 3
3
114893
Mm.298486
Tes3-ps
testis derived transcript 3, pseudogene
3
54339
Human Homolog
RP42[RP42 homolog]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 91 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
ATTTTTCTTT (
7
)
14.7
0.0147
P8 Cb GC
AGTGTGAAAC
(
3
)
8.2
0.0082
P8 Cb GC
AGGGTATTAG
(
2
)
1.6
0.0016
P8 Cb GC
GAACATTTTG
(
4
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
AGTGTGAAAC
(
3
)
6.9
0.0069
Cb medulloblastoma
ATTTTTCTTT (
7
)
4.6
0.0046
Cb medulloblastoma
AGGGTATTAG
(
2
)
2.3
0.0023
Cb medulloblastoma
TAGGGAATAA
(
3
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
AGTGTGAAAC
(
3
)
8
0.008
P8 GC+1d culture
ATTTTTCTTT (
7
)
3.4
0.0034
P8 GC+1d culture
GAACATTTTG
(
4
)
1.1
0.0011
P8 GC+1d culture
GGAGGGGAAG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
AGTGTGAAAC
(
3
)
4.7
0.0047
P8 GC+SHH+1d culture
ATTTTTCTTT (
7
)
3.5
0.0035
P8 GC+SHH+1d culture
GAACATTTTG
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GAATAAAGAA (
6
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
ATTTTTCTTT (
7
)
14.8
0.0148
E15 cortex
AGTGTGAAAC
(
3
)
9.9
0.0099
E15 cortex
GAACATTTTG
(
4
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
ATTTTTCTTT (
7
)
27.3
0.0273
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
ATTTTTCTTT (
7
)
7.2
0.0072
Hypothalamus
AGTGTGAAAC
(
3
)
3.6
0.0036
Hypothalamus
AGGGTATTAG
(
2
)
1.8
0.0018
Hypothalamus
GAACATTTTG
(
4
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
AGTGTGAAAC
(
3
)
18.8
0.0188
E12.5 retina
ATTTTTCTTT (
7
)
7.5
0.0075
E12.5 retina
AGGGTATTAG
(
2
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
AGTGTGAAAC
(
3
)
16.4
0.0164
E14.5 retina
ATTTTTCTTT (
7
)
3.6
0.0036
E14.5 retina
GGAGGGGAAG
(
4
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
AGTGTGAAAC
(
3
)
14.5
0.0145
E16.5 retina
ATTTTTCTTT (
7
)
10.9
0.0109
E16.5 retina
GAACATTTTG
(
4
)
1.8
0.0018
E16.5 retina
GAATAAAGAA (
6
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
AGTGTGAAAC
(
3
)
20
0.02
E18.5 retina
ATTTTTCTTT (
7
)
14.6
0.0146
E18.5 retina
GAACATTTTG
(
4
)
3.6
0.0036
E18.5 retina
GAATAAAGAA (
6
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
ATTTTTCTTT (
7
)
17.7
0.0177
P0.5 retina
AGTGTGAAAC
(
3
)
3.9
0.0039
P0.5 retina
GAACATTTTG
(
4
)
3.9
0.0039
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
ATTTTTCTTT (
7
)
33.4
0.0334
P2.5 retina
AGTGTGAAAC
(
3
)
10.6
0.0106
P2.5 retina
GAACATTTTG
(
4
)
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
AGTGTGAAAC
(
3
)
23.8
0.0238
P4.5 retina
ATTTTTCTTT (
7
)
15.9
0.0159
P4.5 retina
GAATAAAGAA (
6
)
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P4.5 retina
TAGGGAATAA
(
3
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
ATTTTTCTTT (
7
)
23.3
0.0233
P6.5 retina
AGTGTGAAAC
(
3
)
3.3
0.0033
P6.5 retina
GAATAAAGAA (
6
)
3.3
0.0033
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
AGGGTATTAG
(
2
)
1.7
0.0017
P6.5 retina
TAGGGAATAA
(
3
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
ATTTTTCTTT (
7
)
29.7
0.0297
P10.5 crx- retina
AGTGTGAAAC
(
3
)
5.6
0.0056
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
ATTTTTCTTT (
7
)
7.7
0.0077
P10.5 crx+ retina
AGTGTGAAAC
(
3
)
5.8
0.0058
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
ATTTTTCTTT (
7
)
9.3
0.0093
Adult retinal
AGTGTGAAAC
(
3
)
5.6
0.0056
Adult retinal
GGAGGGGAAG
(
4
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
ATTTTTCTTT (
7
)
23
0.023
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
AGTGTGAAAC
(
3
)
3.8
0.0038
ONL
AGGGTATTAG
(
2
)
1.9
0.0019
