Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29854
Hdac6
histone deacetylase 6
X
X 2.0 cM
15185
Mm.29854
C80283
expressed sequence C80283
X
97600
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 53 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTCGCTTCTG (
3
)
3.3
0.0033
P8 Cb GC
ATTCTGAGGA (
6
)
1.6
0.0016
P8 Cb GC
CTGAGTCTGT (
4
)
1.6
0.0016
P8 Cb GC
GGCTTCCTCT (
7
)
1.6
0.0016
Cb medulloblastoma
GTCGCTTCTG (
3
)
4.6
0.0046
Cb medulloblastoma
GGGGATGAGG
(
7
)
2.3
0.0023
P8 GC+1d culture
GTCGCTTCTG (
3
)
3.4
0.0034
P8 GC+SHH+1d culture
GTCGCTTCTG (
3
)
3.5
0.0035
P8 GC+SHH+1d culture
ATTCTGAGGA (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
CCCCACTCAC
(
2
)
1.2
0.0012
3T3 fibroblasts
ATTCTGAGGA (
6
)
3.5
0.0035
3T3 fibroblasts
CCCACTCACA (
5
)
3.5
0.0035
3T3 fibroblasts
CTGAGTCTGT (
4
)
3.5
0.0035
3T3 fibroblasts
GGCTTCCTCT (
7
)
3.5
0.0035
3T3 fibroblasts
GTCGCTTCTG (
3
)
3.5
0.0035
E15 cortex
GGCAGCACAC (
4
)
9.9
0.0099
P1 cortex
GTCGCTTCTG (
3
)
9.1
0.0091
P1 cortex
GGCAGCACAC (
4
)
4.5
0.0045
Hypothalamus
CCCCACTCAC
(
2
)
3.6
0.0036
E12.5 retina
CTGAGTCTGT (
4
)
3.8
0.0038
E12.5 retina
ATTCTGAGGA (
6
)
1.9
0.0019
E12.5 retina
CCCACTCACA (
5
)
1.9
0.0019
E12.5 retina
GGGGATGAGG
(
7
)
1.9
0.0019
E12.5 retina
GTCGCTTCTG (
3
)
1.9
0.0019
E14.5 retina
GCGCTCTGGC
(
2
)
1.8
0.0018
E14.5 retina
GTCGCTTCTG (
3
)
1.8
0.0018
E16.5 retina
ATTCTGAGGA (
6
)
3.6
0.0036
E16.5 retina
GCGCTCTGGC
(
2
)
3.6
0.0036
E18.5 retina
ATTCTGAGGA (
6
)
1.8
0.0018
P0.5 retina
CCCCACTCAC
(
2
)
7.9
0.0079
P0.5 retina
ATTCTGAGGA (
6
)
3.9
0.0039
P0.5 retina
GTCGCTTCTG (
3
)
3.9
0.0039
P0.5 retina
GGGGATGAGG
(
7
)
2
0.002
P2.5 retina
GTCGCTTCTG (
3
)
3.5
0.0035
P2.5 retina
ATTCTGAGGA (
6
)
1.8
0.0018
P2.5 retina
CCCACTCACA (
5
)
1.8
0.0018
P2.5 retina
CCCCACTCAC
(
2
)
1.8
0.0018
P4.5 retina
CCCCACTCAC
(
2
)
2
0.002
P4.5 retina
GTCGCTTCTG (
3
)
2
0.002
P6.5 retina
GTCGCTTCTG (
3
)
10
0.01
P6.5 retina
ATTCTGAGGA (
6
)
1.7
0.0017
P6.5 retina
CCCCACTCAC
(
2
)
1.7
0.0017
P10.5 crx- retina
GTCGCTTCTG (
3
)
3.7
0.0037
P10.5 crx- retina
CCCCACTCAC
(
2
)
1.9
0.0019
P10.5 crx+ retina
GGCTTCCTCT (
7
)
1.9
0.0019
P10.5 crx+ retina
GGGGATGAGG
(
7
)
1.9
0.0019
P10.5 crx+ retina
GTCGCTTCTG (
3
)
1.9
0.0019
Adult retinal
GTCGCTTCTG (
3
)
5.6
0.0056
Adult retinal
CCCCACTCAC
(
2
)
3.7
0.0037
Adult retinal
GGCTTCCTCT (
7
)
1.9
0.0019
ONL
GGCTTCCTCT (
7
)
1.9
0.0019
ONL
GGGGATGAGG
(
7
)
1.9
0.0019
ONL
GTCGCTTCTG (
3
)
1.9
0.0019
