Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29870	Itm2c	integral membrane protein 2C	1		64294
Gene Ontology	ATP binding | biological_process unknown | integral to membrane | membrane fraction
Human Homolog	ITM2C[integral membrane protein 2C]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAGTGGAGC (5) 39.2 0.0392 P8 Cb GC AAGGCTCACA (5) 3.3 0.0033 Cb medulloblastoma GTAGTGGAGC (5) 97.1 0.0971 Cb medulloblastoma AAGGCTCACA (5) 18.5 0.0185 Cb medulloblastoma GAGCACCCAA 11.6 0.0116 Cb medulloblastoma CAGGAAAAAA (3) 6.9 0.0069 P8 GC+1d culture GTAGTGGAGC (5) 41.1 0.0411 P8 GC+1d culture AAGGCTCACA (5) 5.7 0.0057 P8 GC+1d culture GAGCACCCAA 2.3 0.0023 P8 GC+1d culture AGGCTCACAA 1.1 0.0011 P8 GC+1d culture GGTTCTATCC 1.1 0.0011 P8 GC+SHH+1d culture GTAGTGGAGC (5) 15.2 0.0152 P8 GC+SHH+1d culture AAGGCTCACA (5) 8.2 0.0082 P8 GC+SHH+1d culture AGTAAAAATA 2.3 0.0023 P8 GC+SHH+1d culture AGGCTCACAA 1.2 0.0012 P8 GC+SHH+1d culture CAGGAAAAAA (3) 1.2 0.0012 3T3 fibroblasts GTAGTGGAGC (5) 21 0.021 3T3 fibroblasts AAGGCTCACA (5) 3.5 0.0035 E15 cortex AAGGCTCACA (5) 14.8 0.0148 P1 cortex AAGGCTCACA (5) 4.5 0.0045 P1 cortex AGGCTCACAA 4.5 0.0045 P1 cortex GGGGGGGGAA (12) 4.5 0.0045 Hypothalamus GTAGTGGAGC (5) 90.6 0.0906 Hypothalamus AAGGCTCACA (5) 16.3 0.0163 Hypothalamus GAGCACCCAA 10.9 0.0109 Hypothalamus AGGCTCACAA 5.4 0.0054 Hypothalamus CAGGAAAAAA (3) 3.6 0.0036 Hypothalamus GGTTCTATCC 3.6 0.0036 E12.5 retina AAGGCTCACA (5) 5.6 0.0056 E12.5 retina GTAGTGGAGC (5) 5.6 0.0056 E14.5 retina AAGGCTCACA (5) 21.9 0.0219 E14.5 retina GTAGTGGAGC (5) 21.9 0.0219 E14.5 retina CAGGAAAAAA (3) 1.8 0.0018 E16.5 retina GTAGTGGAGC (5) 16.3 0.0163 E16.5 retina AAGGCTCACA (5) 10.9 0.0109 E16.5 retina GAGCACCCAA 1.8 0.0018 E18.5 retina GTAGTGGAGC (5) 10.9 0.0109 E18.5 retina AAGGCTCACA (5) 7.3 0.0073 E18.5 retina CAGGAAAAAA (3) 5.5 0.0055 P0.5 retina GTAGTGGAGC (5) 9.8 0.0098 P0.5 retina AAGGCTCACA (5) 2 0.002 P0.5 retina GAGCACCCAA 2 0.002 P0.5 retina GGGGGGGGAA (12) 2 0.002 P2.5 retina AAGGCTCACA (5) 14.1 0.0141 P2.5 retina GTAGTGGAGC (5) 14.1 0.0141 P2.5 retina CAGGAAAAAA (3) 5.3 0.0053 P2.5 retina AGTAAAAATA 1.8 0.0018 P2.5 retina GGGGGGGGAA (12) 1.8 0.0018 P4.5 retina GTAGTGGAGC (5) 7.9 0.0079 P4.5 retina AAGGCTCACA (5) 4 0.004 P4.5 retina AGTAAAAATA 2 0.002 P4.5 retina GAGCACCCAA 2 0.002 P6.5 retina GTAGTGGAGC (5) 33.3 0.0333 P6.5 retina AAGGCTCACA (5) 16.7 0.0167 P6.5 retina CAGGAAAAAA (3) 3.3 0.0033 P6.5 retina GAGCACCCAA 1.7 0.0017 P10.5 crx- retina GTAGTGGAGC (5) 105.9 0.1059 P10.5 crx- retina AAGGCTCACA (5) 14.9 0.0149 P10.5 crx+ retina GTAGTGGAGC (5) 76.9 0.0769 P10.5 crx+ retina AAGGCTCACA (5) 19.2 0.0192 P10.5 crx+ retina GAGCACCCAA 5.8 0.0058 P10.5 crx+ retina GGTTCTATCC 1.9 0.0019 Adult retinal GTAGTGGAGC (5) 38.9 0.0389 Adult retinal AAGGCTCACA (5) 13 0.013 Adult retinal GGGGGGGGAA (12) 3.7 0.0037 Adult retinal CAGGAAAAAA (3) 1.9 0.0019 Adult retinal GAGCACCCAA 1.9 0.0019 ONL AAGGCTCACA (5) 17.2 0.0172 ONL AGTAAAAATA 3.8 0.0038 ONL GTAGTGGAGC (5) 3.8 0.0038